jamesmullenbach / caml-mimicLinks
multilabel classification of EHR notes
☆292Updated 5 years ago
Alternatives and similar repositories for caml-mimic
Users that are interested in caml-mimic are comparing it to the libraries listed below
Sorting:
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆430Updated 3 years ago
- repository for Publicly Available Clinical BERT Embeddings☆739Updated 5 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆581Updated 2 years ago
- A Label Attention Model for ICD Coding from Clinical Text☆70Updated 3 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- System for Medical Concept Extraction and Linking☆423Updated last year
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆249Updated 5 years ago
- ☆152Updated last year
- ☆100Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆604Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆77Updated 2 years ago
- Code for the emrQA question answering dataset☆150Updated 3 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago
- ☆70Updated 4 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆341Updated 4 years ago
- PyTorch Implementation of BioBERT☆345Updated 2 years ago
- ☆232Updated 8 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆96Updated last year
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆175Updated 2 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 3 years ago
- BioBert Pytorch☆115Updated 2 years ago
- ☆34Updated 8 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆200Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- Pre-training of Graph Augmented Transformers for Medication Recommendation☆125Updated 6 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆307Updated last year
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 4 years ago