dmis-lab / BioSyn
ACL'2020: Biomedical Entity Representations with Synonym Marginalization
☆161Updated last year
Alternatives and similar repositories for BioSyn:
Users that are interested in BioSyn are comparing it to the libraries listed below
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated last year
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆180Updated last year
- Pre-trained Language Model for Biomedical Question Answering☆122Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆174Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆288Updated 3 years ago
- ☆91Updated 5 years ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆316Updated 3 years ago
- SciFive: a text-text transformer model for biomedical literature☆91Updated 7 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- Conversion from brat-flavored standoff to CoNLL format☆50Updated 4 years ago
- Code for the emrQA question answering dataset☆145Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆31Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- ☆224Updated 7 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 4 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 2 years ago
- Python library for converting between BioNLP formats☆20Updated last year
- BioBert Pytorch☆116Updated 2 years ago
- ☆35Updated 4 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- ☆145Updated last year
- BioELECTRA☆51Updated 3 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆27Updated 3 years ago
- A Label Attention Model for ICD Coding from Clinical Text☆68Updated 2 years ago
- ☆71Updated last year
- ☆96Updated 2 years ago