ncbi-nlp / Ab3PLinks
Abbreviation definition dection library trained on PubMed abstracts
☆49Updated 5 years ago
Alternatives and similar repositories for Ab3P
Users that are interested in Ab3P are comparing it to the libraries listed below
Sorting:
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- ☆73Updated last year
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆170Updated 2 years ago
- ☆91Updated 6 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- BioBert Pytorch☆116Updated 2 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆198Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆333Updated 3 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Updated 2 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Updated last year
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- Conversion from brat-flavored standoff to CoNLL format☆53Updated 4 years ago
- ☆99Updated 3 years ago
- ☆123Updated 7 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆46Updated 4 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 3 months ago
- PubMed PICO Element Detection Dataset☆58Updated 7 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago
- Python wraper for MetaMap☆174Updated 5 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- NCBI disease corpus - related resources☆29Updated 8 years ago
- ☆232Updated 8 years ago