nanoporetech / ont_h5_validatorLinks
☆12Updated 6 years ago
Alternatives and similar repositories for ont_h5_validator
Users that are interested in ont_h5_validator are comparing it to the libraries listed below
Sorting:
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Updated 5 years ago
- for visual evaluation of read support for structural variation☆54Updated last year
- Structural variant (SV) analysis tools☆36Updated 11 months ago
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- Hitting associations with k-mers☆45Updated 3 years ago
- Simple convertor from bam to FASTQ☆26Updated 9 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- Master of Pores 2☆23Updated 6 months ago
- vcfdist: Accurately benchmarking phased variant calls☆80Updated this week
- A tutorial on structural variant calling for short read sequencing data☆38Updated 8 months ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 3 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- ☆28Updated last month
- Computational pipeline for calling consensi on R2C2 nanopore data☆31Updated 3 years ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- TIDDIT - structural variant calling☆73Updated 2 months ago
- ☆49Updated 7 months ago
- Structural variant merging tool☆52Updated 10 months ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆100Updated 4 years ago
- A segmentation toolkit for segment the Nanopore RNA signal.☆19Updated 4 months ago
- lobSTR: a short tandem repeat profiler for next generation sequencing data☆52Updated last year
- ☆24Updated 4 months ago
- Structural variant caller☆54Updated 3 years ago
- ☆41Updated 4 months ago
- WDL workflows for variant calling and assembly using ONT☆35Updated 3 weeks ago