mkasa / klabLinks
Kasahara lab. public repository.
☆14Updated 3 months ago
Alternatives and similar repositories for klab
Users that are interested in klab are comparing it to the libraries listed below
Sorting:
- Shark genomics & beyond - This is a central portal page for the project Squalomix, directed mainly by Molecular Life History Laboratory a…☆11Updated 3 weeks ago
- Modular Multi-scale Integrated Genome Graph Browser☆92Updated 2 weeks ago
- [IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long read…☆125Updated 6 years ago
- Molecular convergence detection☆39Updated 2 months ago
- SV caller for nanopore data☆91Updated 5 years ago
- An Oxford Nanopore Basecaller☆71Updated 4 years ago
- Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules☆86Updated 7 years ago
- RNA-seq data amalgamation for a large-scale evolutionary transcriptomics☆12Updated 2 months ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 9 months ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆48Updated 7 years ago
- Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)☆41Updated 2 years ago
- Rapid, interactive, probabilistic analysis of convergent molecular evolution☆16Updated 7 years ago
- ☆44Updated 8 years ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Updated 6 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 9 months ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- TGS scaffolding☆46Updated 3 years ago
- ☆21Updated 3 years ago
- Synteny Imager☆64Updated last month
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- RelocaTE2☆16Updated last year
- Pipeline to annotate sequences at different taxonomic levels using NCBI's taxonomy☆19Updated 12 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 3 years ago
- Implementation of a polymorphism aware phylogenetic model using HYPHY☆19Updated 3 years ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆51Updated 4 years ago
- Filter SAM file for soft and hard clipped alignments☆53Updated last year
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆68Updated 3 years ago