sysbiolab / TreeAndLeafLinks
An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.
☆15Updated 3 months ago
Alternatives and similar repositories for TreeAndLeaf
Users that are interested in TreeAndLeaf are comparing it to the libraries listed below
Sorting:
- tidyMicro GitHup Repository☆21Updated 4 years ago
- Calculate distances between phylogenetic trees in R☆35Updated last week
- Maximum Likelihood Amplicon Pipeline☆22Updated last year
- ☆28Updated last year
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆24Updated last year
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- Scalable relaxed clock phylogenetic dating☆27Updated 4 months ago
- A comprehensive and customizable R package for microbiome analysis.☆23Updated 5 months ago
- ☆20Updated 2 years ago
- Linear Decomposition Model☆25Updated 2 years ago
- A tutorial for pathway visualization using tidyverse, igraph, and ggraph☆60Updated last year
- Drawing 'dendrogram' using 'ggtree'☆13Updated 2 months ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 5 months ago
- METAgenomic LONgitudinal Differential Abundance method☆16Updated 6 years ago
- ☆19Updated 2 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Updated 2 months ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22Updated 5 years ago
- Materials for the STAMPS 2022 course at the MBL in Woods Hole, MA, USA☆22Updated 3 years ago
- Seamless Integration of BLAST Sequence Searches in R☆30Updated 2 years ago
- Talk to the NCBI EUtils☆22Updated 5 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆30Updated 8 months ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- Do microbiome analysis with dada2 and phyloseq object☆14Updated last year
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Updated last year
- A python graphing library for plotting multiple sequence alignments. An app build on top that runs everything in your browser.☆21Updated last month
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆57Updated this week
- ☆13Updated 2 years ago
- K-mer Counting for Biological Sequence Analysis☆27Updated 6 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated 2 years ago
- Tutorial on Bayesian phylogenetic analysis☆51Updated 8 years ago