Mandel Lab Protocols
☆12Mar 3, 2026Updated 2 months ago
Alternatives and similar repositories for protocols
Users that are interested in protocols are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Venus method files in the “.pkg” format for the Semi Automated Passaging, Seeding and Maintenance, of the Allen cell collection of hiPSC …☆11Dec 17, 2020Updated 5 years ago
- genomic variant frequency estimation☆11Sep 7, 2025Updated 8 months ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- A listing of the commands, protocols and other notes that I take on a daily basis☆11Oct 25, 2023Updated 2 years ago
- Polyreactivity Website☆22Jun 26, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Dissimilarity Overlap Curve analysis☆11Nov 14, 2022Updated 3 years ago
- ggplot2 geoms to outline groups of data points☆16Nov 24, 2023Updated 2 years ago
- 3’ Tag RNA-seq pipeline (Work in progress)☆10Mar 14, 2021Updated 5 years ago
- Lectures and Lab Exercises for Biochem 3BP3 Practical Bioinformatics for the Genomics Era☆15Nov 27, 2025Updated 6 months ago
- Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.☆14Feb 28, 2022Updated 4 years ago
- Automate IMGT V-QUEST usage on imgt.org☆15May 19, 2026Updated last week
- Example code from metagenomics book (https://www.gitbook.com/book/kyclark/metagenomics/details)☆18Feb 1, 2019Updated 7 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆20Apr 10, 2026Updated last month
- R package: Evolutionary biology in R☆21Apr 30, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Topics in biology that are not researched as much as they should be☆17Sep 14, 2020Updated 5 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated 3 months ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Feb 15, 2022Updated 4 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Nov 20, 2017Updated 8 years ago
- ☆20Apr 14, 2026Updated last month
- An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)☆22Nov 13, 2023Updated 2 years ago
- A Better Sequencing Simulator for Metagenomics☆20May 8, 2020Updated 6 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆24Aug 9, 2023Updated 2 years ago
- Metagenomics-related extended functionalities to samtools☆22Jul 6, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Specifications for PacBio® native file formats☆31Nov 19, 2024Updated last year
- Knowledge Discovery for COVID19: Search the full text of CORD19 research papers on COVID 19☆27Apr 22, 2020Updated 6 years ago
- Scripts for stat and plot figures in rice microbiome paper☆20May 12, 2019Updated 7 years ago
- Python script to facilitate easy automatic pulling of new papers from Arxiv, Biorxiv, and Medrxiv with custom search features.☆24Mar 27, 2021Updated 5 years ago
- Tools for dealing with tree sequences coming to and from SLiM.☆28Mar 9, 2026Updated 2 months ago
- K-mer Counting for Biological Sequence Analysis☆29Jan 23, 2026Updated 4 months ago
- Tool for conducting systematic literature reviews and mapping studies☆27May 15, 2026Updated 2 weeks ago
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆31Oct 1, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- The Open Lab Book: A collection of freely distributable scientific protocols☆34Jun 26, 2020Updated 5 years ago
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 4 years ago
- A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.☆36Apr 4, 2025Updated last year
- A library and toolkit for pharmacometrics☆68Updated this week
- Quality assessing, analyzing and testing the statistical significance of real-time quantitative PCR data☆30Sep 4, 2025Updated 8 months ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆34Aug 16, 2022Updated 3 years ago
- Interim data for the Darwin Tree of Life Project☆33Jun 7, 2020Updated 5 years ago