Alternatives and similar repositories for metagenomics-book

Users that are interested in metagenomics-book are comparing it to the libraries listed below

• cjfields / bioperl6
  reimplementation of BioPerl classes in Raku (e.g. the language formerly known as Perl6)
  ☆48Updated 6 years ago
• genoo / GenOO
  A Modern Perl Framework for High Throughput Sequencing analysis
  ☆17Updated 5 years ago
• pierre-vigier / Perl6-Math-Matrix
  fully featured data type for matrix math
  ☆20Updated 5 years ago
• indraniel / fqgrep
  An approximate sequence pattern matcher for FASTQ/FASTA files.
  ☆31Updated 9 years ago
• dnbaker / bonsai
  Bonsai: Fast, flexible taxonomic analysis and classification
  ☆72Updated last year
• raku-community-modules / HTTP-UserAgent
  Web user agent class for Raku
  ☆38Updated 3 months ago
• galantelab / sandy
  A straightforward and complete next-generation sequencing read simulator
  ☆21Updated last year
• lstein / Perl-GD
  Perl GD module for bitmap graphics
  ☆33Updated last year
• steineggerlab / petasearch
  🧬 Efficient parallelized peta-scale protein database search
  ☆41Updated last year
• husonlab / dendroscope3
  Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks
  ☆45Updated 4 months ago
• EntropyOrg / p5-Devel-IPerl
  Perl5 language kernel for Jupyter <http://jupyter.org/>
  ☆96Updated 2 years ago
• mfiers / Moa
  Lightweight workflows in bioinformatics:
  ☆24Updated 10 years ago
• Ensembl / Bio-DB-HTS
  Git repo for Bio::HTS module on CPAN, providing Perl links into HTSlib
  ☆25Updated 7 months ago
• wyim-pgl / DCBLAST
  Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools
  ☆12Updated 5 years ago
• wurmlab / genevalidatorapp
  A web wrapper for GeneValidator
  ☆11Updated 4 years ago
• kloetzl / biozsh
  the z in bioinformatics
  ☆33Updated 2 years ago
• batmen-lab / SGPvalue
  ☆13Updated 10 months ago
• bioperl / bioperl.github.io
  The BioPerl Web site: http://bioperl.org
  ☆14Updated 6 years ago
• luslab / luslab-nf-modules
  Luslab nextflow modules
  ☆14Updated 4 years ago
• kyclark / bioinformatics_primer
  Bioinformatics with Unix, bash, Make, Python, and parallel
  ☆22Updated 5 years ago
• lskatz / fasten
  Fasten toolkit, for streaming operations on fastq files
  ☆79Updated 4 months ago
• birney / wise3
  The 3rd incarnation of the Wise package for sequence analysis
  ☆22Updated 11 years ago
• hallamlab / LCAStar
  Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree
  ☆16Updated last year
• MatthewRalston / kmerdb
  Python CLI for alignment-free genomics.
  ☆12Updated last month
• Nanguage / bioView
  Readability enhancement tool for bioinformatics data file format
  ☆30Updated 5 years ago
• lh3 / PortableCrystal
  Portable Crystal binary distributions for Linux on x86_64
  ☆15Updated 4 years ago
• bredelings / BAli-Phy
  Bayesian co-estimation of phylogenies and multiple alignments via MCMC
  ☆47Updated this week
• vsbuffalo / snakemake-tutorial
  Snakemake tutorial materials
  ☆19Updated 5 years ago
• arewebioyet / arewebioyet.github.io
  Rust in bioinformatics and computational biology
  ☆20Updated 2 years ago
• phac-nml / galaxy_tools
  Contains a set of Galaxy Tools mostly written by the Bioinformatics core at NML
  ☆16Updated 6 months ago