minoTour / minoTour_archiveLinks
Real time data analysis tools for the minION sequencing platform.
☆30Updated 3 years ago
Alternatives and similar repositories for minoTour_archive
Users that are interested in minoTour_archive are comparing it to the libraries listed below
Sorting:
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Analysis tool for Nanopore sequencing data☆33Updated 6 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- Additional tools for analyzing Oxford Nanopore minION data☆17Updated 9 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆48Updated 4 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 4 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- UCSC Nanopore☆43Updated 5 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated last year
- Code for nanopore paper☆33Updated 10 years ago
- ☆26Updated 5 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 7 years ago
- A tool to benchmark mappers and different parameters within minutes☆44Updated 5 years ago
- Maximum likelihood demultiplexing☆47Updated 4 months ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆44Updated 4 years ago
- SNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organism…☆59Updated 2 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Updated Kraken DB install scripts to cope with new-ish NCBI structure☆47Updated 8 years ago
- A versatile toolkit for k-mers with taxonomic information☆78Updated 10 months ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- a simple C++ library for parsing and manipulating VCF files, + many command-line utilities☆20Updated 8 years ago
- 10x Genomics Reads Simulator☆45Updated last year