milaboratory / mixcrLinks
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
☆377Updated last week
Alternatives and similar repositories for mixcr
Users that are interested in mixcr are comparing it to the libraries listed below
Sorting:
- TCR and BCR assembly from RNA-seq data☆330Updated last week
- ENCODE ATAC-seq pipeline☆434Updated last year
- zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs☆286Updated last year
- Application for making ENCODE Blacklists☆327Updated 4 years ago
- 10x Genomics Single Cell Analysis☆437Updated 9 months ago
- GTEx & TOPMed data production and analysis pipelines☆388Updated 2 months ago
- Collections of library structure and sequence of popular single cell genomic methods☆485Updated 6 months ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆529Updated 4 months ago
- Intro to ChIPseq using HPC☆316Updated 2 years ago
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆455Updated last year
- T/B cell receptor sequencing analysis notes☆268Updated 11 months ago
- ☆280Updated 3 weeks ago
- Analysis Pipeline for Single Cell ATAC-seq☆320Updated 2 years ago
- RNA-seq workflow using STAR and DESeq2☆346Updated 2 months ago
- ENCODE ChIP-seq pipeline☆275Updated last year
- Customizable workflows based on snakemake and python for the analysis of NGS data☆397Updated last week
- parallel fastq-dump wrapper☆299Updated 2 years ago
- A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.☆200Updated 4 months ago
- ATAC-seq peak-calling and QC analysis pipeline☆216Updated last week
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆426Updated last year
- A tool to find sequencing data and metadata from public databases.☆592Updated last year
- Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-dropl…☆298Updated 3 weeks ago
- Analysis of single cell RNA-seq data course☆158Updated 3 years ago
- Single-cell Transcriptome and Regulome Analysis Pipeline☆294Updated 2 years ago
- ☆442Updated 5 years ago
- ☆401Updated 3 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆231Updated 2 months ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆226Updated last month
- ☆209Updated 3 months ago
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆233Updated last month