reasoning model trained using GRPO towards rosetta REF2015 for protein stability
☆101Oct 16, 2025Updated 5 months ago
Alternatives and similar repositories for pro-1
Users that are interested in pro-1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The first 100B protein language model from biomap☆19Mar 17, 2025Updated last year
- ☆108Mar 10, 2026Updated 2 weeks ago
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆44Mar 10, 2025Updated last year
- ☆33Oct 14, 2024Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 7 months ago
- ICLR 2025 paper: 3DMolFormer: A Dual-channel Framework for Structure-based Drug Discovery☆28Apr 25, 2025Updated 11 months ago
- ☆135Jun 3, 2025Updated 9 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆33Jun 9, 2024Updated last year
- Extension of ThermoMPNN for double mutant predictions☆56Oct 8, 2025Updated 5 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆572Mar 8, 2026Updated 2 weeks ago
- User friendly and accurate binder design pipeline☆1,048Mar 13, 2026Updated last week
- ☆242Feb 12, 2026Updated last month
- A drop-in replacement for Rosetta Relax☆27Jan 30, 2026Updated last month
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆340Jun 11, 2025Updated 9 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆81Sep 11, 2025Updated 6 months ago
- Learning Universal Representations of Intermolecular Interactions with ATOMICA☆205Mar 5, 2026Updated 2 weeks ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 2 years ago
- ☆74Feb 13, 2026Updated last month
- Protein representation and design under a single training scheme☆24Mar 3, 2026Updated 3 weeks ago
- Consolidated repository to perform RLXF☆40Mar 12, 2026Updated last week
- ☆37Mar 30, 2025Updated 11 months ago
- A Unified Evaluation Suite for Protein Design☆128Jan 27, 2026Updated last month
- A collection of AWESOME things about LLM-Centric-Molecular-Discovery.☆24May 20, 2025Updated 10 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆121May 27, 2025Updated 9 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆103May 25, 2025Updated 10 months ago
- ☆15Feb 27, 2026Updated 3 weeks ago
- Protein prediction models implemented with Modal☆30Mar 9, 2026Updated 2 weeks ago
- Protein Engineering via Exploration of an Energy Landscape☆129Mar 10, 2026Updated 2 weeks ago
- ☆96Mar 17, 2026Updated last week
- Public Release of ProGen3 family of Models☆104Jul 21, 2025Updated 8 months ago
- ☆83Oct 23, 2025Updated 5 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆89Oct 6, 2025Updated 5 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated 11 months ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆36Dec 12, 2024Updated last year
- The Family of Diffusion Protein Language Models (DPLM)☆315Jul 25, 2025Updated 8 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆245Jul 24, 2025Updated 8 months ago
- ☆31Nov 23, 2025Updated 4 months ago
- ☆116Feb 1, 2026Updated last month
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆85Dec 3, 2025Updated 3 months ago