reasoning model trained using GRPO towards rosetta REF2015 for protein stability
☆102Oct 16, 2025Updated 10 months ago
Alternatives and similar repositories for pro-1
Users that are interested in pro-1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Apr 17, 2025Updated last year
- Protein Engineering via Exploration of an Energy Landscape☆143Aug 12, 2026Updated 3 weeks ago
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆45Mar 10, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆140Jan 27, 2026Updated 7 months ago
- ☆34Jun 9, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆84May 27, 2026Updated 3 months ago
- ☆147Jun 16, 2026Updated 2 months ago
- ☆145Jun 3, 2025Updated last year
- Protein prediction models implemented with Modal☆34Aug 12, 2026Updated 3 weeks ago
- ☆118Jul 20, 2026Updated last month
- One protein is all you need (ICLR 2026)☆116Aug 1, 2026Updated last month
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆33Jun 9, 2024Updated 2 years ago
- ☆42Mar 30, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆101Jul 9, 2026Updated last month
- ☆24Sep 5, 2025Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆629Mar 8, 2026Updated 6 months ago
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆338Jul 1, 2026Updated 2 months ago
- Official repository of PXDesign☆256Dec 31, 2025Updated 8 months ago
- ☆259Feb 12, 2026Updated 6 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- ☆74Feb 13, 2026Updated 6 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆376Jun 11, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- Public Release of ProGen3 family of Models☆114Jul 21, 2025Updated last year
- Ctrl-DNA: Controllable Cell-Type-Specific Regulatory DNA Design via Constrained RL☆20May 28, 2025Updated last year
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆51Nov 4, 2025Updated 10 months ago
- ☆30Apr 30, 2026Updated 4 months ago
- ESMDynamic repo☆36Jun 26, 2026Updated 2 months ago
- ICLR 2025 paper: 3DMolFormer: A Dual-channel Framework for Structure-based Drug Discovery☆33Apr 25, 2025Updated last year
- ☆55Apr 22, 2026Updated 4 months ago
- Controllable Protein Sequence Generation with LLM Preference Optimization, AAAI 2025☆18Mar 10, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆84Aug 27, 2026Updated last week
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆113May 25, 2025Updated last year
- Design scripts corresponding to "Computational design of sequence-specific DNA-binding proteins."☆22Oct 23, 2025Updated 10 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆97Jul 31, 2026Updated last month
- Official repository for the ProteinDJ protein design pipeline☆141Updated this week
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year