KlausVigo / ggnetworx
phylogenetic networks using ggplot2 and ggtree
☆13Updated 4 months ago
Alternatives and similar repositories for ggnetworx:
Users that are interested in ggnetworx are comparing it to the libraries listed below
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- ☆19Updated last year
- This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…☆16Updated last year
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 9 months ago
- phylogenetic networks using ggplot2 and ggtree☆11Updated 3 years ago
- An application to compare genetic maps with D3 & Shiny☆22Updated 2 years ago
- A course in the theory and practice of phylogenetic inference from DNA sequence data☆28Updated 2 weeks ago
- Easy to define segments in y-axis for 'ggplot2'.☆28Updated 5 years ago
- Using ggtree to Visualize Data on Tree-Like Structure☆24Updated 5 years ago
- A DRAFT, early stage book on snakemake.☆18Updated last year
- ☆16Updated 3 years ago
- ☆18Updated 9 years ago
- R/Shiny application for viewing microbial community data☆19Updated 4 years ago
- An Amazing Shiny App☆17Updated 3 years ago
- An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data☆19Updated last year
- ☆18Updated 8 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Updated 3 weeks ago
- Scalable relaxed clock phylogenetic dating☆24Updated last year
- Phylogenetic ANalyses of DiversificAtion☆24Updated 3 months ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Updated 3 months ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last week
- R/Package Version Check☆23Updated 3 years ago
- ☆17Updated 6 years ago
- R package to estimate kinship and FST from SNP data☆20Updated 7 months ago
- a take on ordination plots using ggplot2☆64Updated 9 months ago
- population genetic simulations with R and Shiny☆27Updated 6 months ago
- babette is an R package to work with BEAST2☆45Updated last week
- Implementation of the treeSeg algorithm as an R package.☆14Updated 3 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year