Alternatives and similar repositories for ggnetworx

Users that are interested in ggnetworx are comparing it to the libraries listed below

• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆24Updated last week
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• grunwaldlab / analysis_of_microbiome_community_data_in_r
  This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…
  ☆16Updated last year
• fawda123 / ggord
  a take on ordination plots using ggplot2
  ☆65Updated last year
• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆16Updated last year
• gmbecker / genbankr
  ☆20Updated last year
• lamho86 / phylolm
  ☆37Updated 9 months ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• thibautjombart / treespace
  Explore spaces of phylogenetic trees
  ☆29Updated last year
• thijsjanzen / treestats
  ☆19Updated last month
• ropensci / beautier
  R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
  ☆13Updated this week
• devillemereuil / QGglmm
  Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…
  ☆16Updated 6 months ago
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆19Updated last year
• lvclark / polysat
  polysat 1.7: tools for polyploid microsatellite analysis
  ☆12Updated 7 months ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆56Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated this week
• SchlossLab / mikropml-snakemake-workflow
  Snakemake template for building reusable and scalable machine learning pipelines with mikropml
  ☆13Updated 5 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last month
• ibest / Seed
  R/Shiny application for viewing microbial community data
  ☆19Updated 4 years ago
• CenterForStatistics-UGent / RCM
  A model-based visualization method for microbiome data
  ☆16Updated 2 years ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆28Updated 5 years ago
• kpmainali / CooccurrenceAffinity
  Computes affinity between two entities based on their co-occurrence
  ☆27Updated last month
• cjbattey / driftR
  population genetic simulations with R and Shiny
  ☆28Updated 9 months ago
• AnneChao / SpadeR
  SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based…
  ☆29Updated 7 years ago
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆44Updated 5 years ago
• ms609 / TreeDist
  Calculate distances between phylogenetic trees in R
  ☆32Updated this week
• KlausVigo / tanggle
  phylogenetic networks using ggplot2 and ggtree
  ☆11Updated last month
• crsl4 / phylogenetics-class
  A course in the theory and practice of phylogenetic inference from DNA sequence data
  ☆29Updated 3 months ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆15Updated 7 years ago