tamminenlab / blaster
BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)
☆14Updated last year
Alternatives and similar repositories for blaster:
Users that are interested in blaster are comparing it to the libraries listed below
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Racmacs R package for performing antigenic cartography☆21Updated 9 months ago
- R package for multiple sequence alignment☆18Updated 2 weeks ago
- Symbol Layer Based on `ggplot2` and `ggstar`☆9Updated 4 years ago
- useful functions for ggplot☆18Updated last month
- An Amazing Shiny App☆17Updated 3 years ago
- ☆19Updated last year
- A template for creating modular shiny applications that meet academic standards and are reproducible☆22Updated last month
- Practical R Packaging with Docker☆33Updated 5 months ago
- ggplot to loon☆24Updated 11 months ago
- ☆16Updated 9 months ago
- phylogenetic networks using ggplot2 and ggtree☆11Updated 3 years ago
- ☆16Updated 4 years ago
- Add statistical test or annotation to your ggplot2 plots,☆46Updated 2 years ago
- An application to compare genetic maps with D3 & Shiny☆22Updated 2 years ago
- scatter pie plot☆62Updated 3 months ago
- a take on ordination plots using ggplot2☆64Updated 9 months ago
- provide extra layers for ggplot2☆37Updated 5 years ago
- Integral analysis of diversity based on Hill numbers☆11Updated 4 years ago
- ggplot2 geoms to outline groups of data points☆15Updated last year
- An R package for easy pie charts☆15Updated 3 weeks ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated last week
- dendrograms in ggplot2.☆10Updated 3 years ago
- Create and Query a Local Copy of GenBank in R☆26Updated last month
- R package for creating sequence logo plots☆22Updated last year
- tidy processing of biological sequences in R☆42Updated 3 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated last week
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 9 months ago