tamminenlab / blaster
BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)
☆14Updated 10 months ago
Alternatives and similar repositories for blaster:
Users that are interested in blaster are comparing it to the libraries listed below
- ☆16Updated last year
- Practical R Packaging with Docker☆30Updated 2 months ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆14Updated 6 years ago
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- A template for creating modular shiny applications that meet academic standards and are reproducible☆17Updated this week
- An Amazing Shiny App☆17Updated 3 years ago
- Racmacs R package for performing antigenic cartography☆20Updated 6 months ago
- provide extra layers for ggplot2☆37Updated 4 years ago
- Symbol Layer Based on `ggplot2` and `ggstar`☆9Updated 4 years ago
- useful functions for ggplot☆18Updated this week
- ☆17Updated 6 months ago
- ggplot2 geoms to outline groups of data points☆15Updated last year
- phylogenetic networks using ggplot2 and ggtree☆11Updated 2 years ago
- Perform phylogenetic path analysis in R.☆12Updated 3 months ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆20Updated 2 months ago
- ggplot to loon☆23Updated 8 months ago
- scatter pie plot☆61Updated last week
- R package for multiple sequence alignment☆17Updated 4 months ago
- a take on ordination plots using ggplot2☆63Updated 5 months ago
- Create and Query a Local Copy of GenBank in R☆26Updated 8 months ago
- An application to compare genetic maps with D3 & Shiny☆22Updated last year
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- R package to Import and Modify SVG (XML) Graphic Files☆22Updated 2 months ago
- A model-based visualization method for microbiome data☆16Updated last year
- Biology 202 Course Website☆18Updated 4 years ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 5 months ago
- phylogenetic networks using ggplot2 and ggtree☆13Updated 3 weeks ago
- A `DataFrame` (`S4Vectors`) backend for `dplyr`☆21Updated 3 months ago
- Create, modify and analyse phylogenetic trees in R☆20Updated this week