Alternatives and similar repositories for PDBrenum

Users that are interested in PDBrenum are comparing it to the libraries listed below

• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆55Updated last month
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated last month
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆27Updated last year
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• JBEI / foldy
  Foldy: a web-based platform for interactive protein structure analysis
  ☆23Updated this week
• cmbi / dssp
  The DSSP building software
  ☆46Updated 2 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆42Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆45Updated 3 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 3 years ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆40Updated last year
• proteinphysiologylab / frustratometeR
  ☆36Updated last month
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆56Updated 4 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆53Updated 11 months ago
• ur-whitelab / peptide-dashboard
  Web cards/apps describing peptides
  ☆29Updated 2 years ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated 2 months ago
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆30Updated last year
• sbliven / rcsbsearch
  Python interface for the RCSB search API.
  ☆20Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 4 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆19Updated last month
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated 2 months ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆73Updated 11 months ago
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆26Updated 2 months ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆31Updated this week
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago