ayueme / easyTCGALinks
Make TCGA download and prepare easy!
☆133Updated last year
Alternatives and similar repositories for easyTCGA
Users that are interested in easyTCGA are comparing it to the libraries listed below
Sorting:
- Machine learning-based integration model with elegant performance☆140Updated 2 weeks ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆113Updated last month
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.☆249Updated 2 months ago
- An implement R package to visualize GSEA results☆174Updated 3 weeks ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆149Updated 4 years ago
- plots function for array☆94Updated last year
- A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…☆111Updated 3 months ago
- ☆92Updated 6 months ago
- ☆94Updated 5 years ago
- A package for reference mapping and nice visualization☆21Updated last year
- ☆104Updated 4 years ago
- These are scripts for pan-cacner NK cells analyses.☆69Updated last year
- ☆34Updated last year
- collected resource for scRNA-seq analysis☆60Updated last year
- These are scripts for pan-cacner B cells analyses.☆52Updated 11 months ago
- ☆109Updated 2 years ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆83Updated 9 months ago
- 抓取网络文章到github issues保存☆161Updated this week
- Quantifying metabolism activity at the single-cell resolution☆136Updated 2 weeks ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆155Updated 3 months ago
- The integration of single cell rank-based gene set enrichment analysis☆127Updated last week
- Scissor package☆226Updated last year
- 医学和生信笔记公众号“生信数据挖掘”合集☆52Updated last year
- Machine learning-based identification of tumor-infiltrating immune cell-associated lncRNAs for improving outcomes and immunotherapy respo…☆14Updated 2 years ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆51Updated 3 years ago
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆115Updated 9 months ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated 8 months ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆144Updated 3 years ago
- Papers with code for single cell related papers☆288Updated 2 years ago
- Reproducibility repo accompanying Angelidis et al. "An atlas of the aging lung mapped by single cell transcriptomics and deep tissue prot…☆9Updated 6 years ago