mdozmorov / E-MTAB-3610
Processed E-MTAB-3610 dataset - Transcriptional Profiling of 1,000 human cancer cell lines
☆11Updated 3 years ago
Alternatives and similar repositories for E-MTAB-3610
Users that are interested in E-MTAB-3610 are comparing it to the libraries listed below
Sorting:
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Code to reproduce TNBC analysis and figures☆23Updated 2 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Updated 4 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Updated 3 years ago
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆18Updated 8 months ago
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆18Updated last week
- CellAnn☆12Updated last year
- Multi-omics data normalisation, model fitting and visualisation.☆25Updated 2 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- XEnograft Visualization & Analysis☆11Updated last month
- SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.☆12Updated 2 weeks ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆12Updated 9 years ago
- reverse gene expression score☆14Updated last year
- A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.☆13Updated 2 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆12Updated 3 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- R package for Flexible dot plots☆29Updated 2 years ago
- Course Materials for Genomics Data Mining☆22Updated 3 months ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆34Updated 2 years ago
- Processed rna-seq data, copy number variation data, and methylation data on GEO and TCGA☆25Updated 2 years ago
- R package☆22Updated last year
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆22Updated 7 years ago
- ☆17Updated 5 years ago
- Multiple trajectory alignment of time-series data☆13Updated last year
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆13Updated 4 years ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆35Updated 5 months ago
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆36Updated 2 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆44Updated last year
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago