Alternatives and similar repositories for E-MTAB-3610:

Users that are interested in E-MTAB-3610 are comparing it to the libraries listed below

• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆25Updated last year
• Vivianstats / scDesign
  A statistical simulator for rational scRNA-seq experimental design
  ☆11Updated 4 years ago
• TransBioInfoLab / TNBC_analysis
  Code to reproduce TNBC analysis and figures
  ☆23Updated 2 years ago
• Nanostring-Biostats / SpatialOmicsOverlay
  Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).
  ☆18Updated 2 months ago
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆24Updated last year
• Simon-Leonard / FlexDotPlot
  R package for Flexible dot plots
  ☆29Updated 2 years ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆20Updated last month
• liuhong-jia / scAnno
  ☆24Updated last year
• XSLiuLab / PC_CNA_signature
  Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/
  ☆12Updated 3 years ago
• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆43Updated 7 months ago
• DongqiangZeng0808 / Blasso
  Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers
  ☆20Updated 2 years ago
• lanagarmire / Single-cell-drug-repositioning
  ☆15Updated 8 months ago
• LTLA / scRNAseq
  Clone of the Bioconductor repository for the scRNAseq package.
  ☆25Updated last month
• astrazeneca-cgr-publications / PEACOK
  Phenome Exome Association and Correlation Of Key phenotypes
  ☆28Updated 3 years ago
• choisy / cutoff
  R package: determining cutoff values from bimodal data
  ☆10Updated 11 months ago
• AlexsLemonade / OpenPBTA-manuscript
  The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
  ☆13Updated last year
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆22Updated 2 months ago
• bhklab / Xeva
  XEnograft Visualization & Analysis
  ☆11Updated 3 months ago
• rujinwang / EPIC
  cEll tyPe enrIChment
  ☆14Updated 2 years ago
• Pinlyu3 / CellAnn_shinyapp
  CellAnn
  ☆12Updated last year
• WeersmaLabIBD / SingleCell
  ☆9Updated last year
• masadler / DrugTargetMethodComparison
  ☆13Updated last year
• ocbe-uio / DIscBIO
  A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
  ☆12Updated last year
• ZAEDPolSl / MrGSEA
  MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…
  ☆9Updated 2 years ago
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆10Updated 3 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆20Updated last year
• arorarshi / survClust
  An outcome weighted supervised clustering algorithm, designed to classify patients according to their molecular as well as time-event or …
  ☆16Updated 10 months ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated last month
• mm-shah / MetaNeighbor
  A method to rapidly assess cell type identity using both functional and random gene sets
  ☆13Updated 5 years ago