matdoering / openPrimeRLinks
An R Package for Multiplex PCR Primer Design and Analysis
☆28Updated 3 months ago
Alternatives and similar repositories for openPrimeR
Users that are interested in openPrimeR are comparing it to the libraries listed below
Sorting:
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- A catalogue of available long read sequencing data analysis tools☆80Updated last month
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated 2 years ago
- NGSNGS: Next generation simulator for next generation sequencing data☆54Updated 11 months ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆50Updated 7 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆32Updated 3 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆32Updated 2 years ago
- Evolutionary Transcriptomics with R☆46Updated 2 weeks ago
- A shiny package for microbiome functional enrichment analysis☆36Updated 6 months ago
- A python package and a set of shell commands to handle GTF files☆49Updated last year
- visual analysis of your VCF files☆38Updated 2 years ago
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- A versatile toolkit for k-mers with taxonomic information☆80Updated 2 months ago
- Generate unique KMERs for every contig in a FASTA file☆48Updated 3 years ago
- Get, parse, and extract information from the SRA metadata files☆45Updated 3 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆17Updated last year
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- A reference viral database (RVDB)☆26Updated 6 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆25Updated 4 months ago
- ☆27Updated 5 years ago
- This repository hosts a large collection of Nextflow snippets☆56Updated 9 months ago
- ☆35Updated 2 years ago
- Primer3Plus is an advanced web interface for primer3.☆41Updated 6 months ago
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Updated 9 months ago
- ☆17Updated 2 months ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆36Updated last year
- A Nextflow pipeline to identify quality control issues with new sequencing data.☆28Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago