Alternatives and similar repositories for imio:

Users that are interested in imio are comparing it to the libraries listed below

• brainglobe / napari-brainreg
  Visualise brainreg registration output
  ☆10Updated 3 years ago
• brainglobe / brainglobe-napari-io
  Read and write files from the BrainGlobe neuroanatomy suite
  ☆13Updated 2 weeks ago
• brainglobe / brainglobe-registration
  Registration to BrainGlobe atlases in napari using Elastix
  ☆21Updated last week
• brainglobe / bg-brainrender-gui
  A GUI built on brainrender: visualise brain regions, neurons and labelled cells.
  ☆12Updated 4 years ago
• brainglobe / brainreg-napari
  Automated 3D brain registration in napari with support for multiple species and atlases.
  ☆15Updated last year
• brainglobe / brainrender-napari
  A napari plugin to render BrainGlobe atlases and associated data as layers.
  ☆21Updated last week
• brainglobe / cellfinder-core
  Standalone cellfinder cell detection algorithm
  ☆19Updated last year
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆30Updated 2 weeks ago
• neuroinformatics-unit / course-swc-timeseries-analysis-2023
  ☆10Updated 2 years ago
• neuroinformatics-unit / actions
  Re-usable GitHub Action scripts
  ☆10Updated 2 weeks ago
• neuroinformatics-unit / NeuroBlueprint
  Lightweight data specification for systems neuroscience, inspired by BIDS.
  ☆17Updated 3 months ago
• brainglobe / bgviewer
  Visualisation and exploration of brain atlases
  ☆9Updated 4 years ago
• NicoKiaru / ABBA-Python
  How to use Aligning Big Brains and Atlases with Python
  ☆15Updated last year
• janclemenslab / napari-video
  Napari plugin for working with video files.
  ☆12Updated 5 months ago
• brainglobe / cellfinder-napari
  Efficient cell detection in large images using cellfinder in napari
  ☆23Updated last year
• bkntr / brainways
  Brainways
  ☆16Updated last week
• neuroinformatics-unit / fancylog
  Fancier logging with python.
  ☆12Updated 2 weeks ago
• brainglobe / BrainGlobe
  General information, resources and dicussions for the BrainGlobe project.
  ☆11Updated 3 weeks ago
• brainglobe / morphapi
  A Python package to download neuronal morphologies
  ☆17Updated 2 weeks ago
• benlansdell / ethome
  Tools for machine learning of animal behavior
  ☆13Updated last year
• BelloneLab / lisbet
  LISBET Is a Social BEhavior Transformer (LISBET)
  ☆10Updated last month
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆38Updated 2 weeks ago
• neuroinformatics-unit / spikewrap
  A package to manage electrophysiology analysis.
  ☆19Updated this week
• brainglobe / brainrender_paper
  Code for recreating the figures in the brainrender paper (Claudi et al. 2020)
  ☆12Updated 4 years ago
• neuroinformatics-unit / python-cookiecutter
  Utility to create a basic Python project structure with tests, CI etc.
  ☆28Updated this week
• neuroinformatics-unit / swc-hpc-pose-estimation
  Pose estimation scripts to be run on the SWC HPC cluster
  ☆12Updated last year
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago