brainglobe / imioLinks
Loading and saving of image data.
☆10Updated last year
Alternatives and similar repositories for imio
Users that are interested in imio are comparing it to the libraries listed below
Sorting:
- Visualise brainreg registration output☆10Updated 3 years ago
- Standalone cellfinder cell detection algorithm☆20Updated last year
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 3 weeks ago
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated 3 weeks ago
- Registration to BrainGlobe atlases in napari using Elastix☆23Updated 3 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Anatomical space conventions made easy.☆10Updated 3 weeks ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- ☆10Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated this week
- Build unbiased anatomical templates from individual images☆12Updated last week
- NIU website on common software problems and their troubleshooting☆10Updated 3 weeks ago
- CloudReg☆11Updated last year
- Re-usable GitHub Action scripts☆12Updated 3 weeks ago
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- A repository for our participation in Google Summer of Code☆13Updated 6 months ago
- GPU-based 3D non-rigid volumetric registration☆41Updated 2 months ago
- Brainways☆21Updated 2 months ago
- Napari plugin for working with video files.☆13Updated 2 months ago
- Fancier logging with python.☆14Updated 3 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 8 months ago
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆12Updated last week
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- A Python package to download neuronal morphologies☆17Updated 3 weeks ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last month
- Fast, volumetric cell detection. In development.☆20Updated 4 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 3 weeks ago
- Utility to create a basic Python project structure with tests, CI etc.☆33Updated 3 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year