brainglobe / imio
Loading and saving of image data.
☆10Updated last year
Alternatives and similar repositories for imio:
Users that are interested in imio are comparing it to the libraries listed below
- Visualise brainreg registration output☆10Updated 3 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated last week
- Build unbiased anatomical templates from individual images☆11Updated last week
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated last week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Standalone cellfinder cell detection algorithm☆19Updated last year
- Re-usable GitHub Action scripts☆10Updated last week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆21Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- ☆10Updated 2 years ago
- NIU website on common software problems and their troubleshooting☆10Updated last month
- Visualisation and exploration of brain atlases☆9Updated 4 years ago
- Segmentation of anatomical structures in a common coordinate space☆30Updated last week
- Napari plugin for working with video files.☆12Updated 6 months ago
- Brainways☆16Updated last month
- A repository for our participation in Google Summer of Code☆11Updated this week
- Data processing tools for animal behavioural analysis☆17Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆18Updated 4 months ago
- ☆10Updated last year
- How to use Aligning Big Brains and Atlases with Python☆15Updated last year
- A Python package to download neuronal morphologies☆17Updated last week
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 4 years ago
- Fancier logging with python.☆12Updated last week
- Efficient cell detection in large images using cellfinder in napari☆23Updated last year
- General information, resources and dicussions for the BrainGlobe project.☆11Updated last month
- Fast, volumetric cell detection. In development.☆16Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆28Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated last week
- Tools for machine learning of animal behavior☆14Updated last year
- A package to manage electrophysiology analysis.☆22Updated this week