An ultrafast tool for genome-wide survey of microsatellites and primer design
☆38Oct 16, 2024Updated 2 years ago
Alternatives and similar repositories for krait
Users that are interested in krait are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a flexible tool for microsatellite investigation and visualization☆10Jun 15, 2026Updated 4 months ago
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 9 months ago
- Draw the Gene structure based on the GFF and gene's ID☆10Jun 13, 2020Updated 6 years ago
- ☆22Sep 22, 2022Updated 4 years ago
- 整合型的对于生物学注释的信息/GO和KEGG全谱注 释和富集☆15Nov 8, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A transposition caller.☆12Oct 5, 2023Updated 3 years ago
- QTG_Finder, a QTL causal gene prioritization tool☆11Nov 9, 2024Updated last year
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- PopSTR - A Population based microsatellite genotyper☆33Oct 23, 2023Updated 3 years ago
- A read extraction and realignment tool for next generation sequencing data☆107Oct 29, 2022Updated 4 years ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆84Dec 5, 2022Updated 3 years ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆22Aug 8, 2023Updated 3 years ago
- design common and specific primer for LAMP using the whole genome☆15Feb 12, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Jul 9, 2026Updated 3 months ago
- GUI for batch primer design with graphical output for PCR and SNP detection☆17Jun 28, 2026Updated 4 months ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15May 9, 2019Updated 7 years ago
- Similar genome assisted reassembly pipeline for PacBio long reads☆11Dec 7, 2021Updated 4 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Feb 1, 2021Updated 5 years ago
- genotyping by Mapping-free ALternate-allele detection of known VAriants☆10Mar 6, 2023Updated 3 years ago
- Just Annotate My Genome☆19May 21, 2026Updated 5 months ago
- ☆15Jun 6, 2023Updated 3 years ago
- LDkit: a parallel computing toolkit for linkage disequilibrium analysis☆19Sep 4, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆108Feb 27, 2023Updated 3 years ago
- Papillomavirus genome annotation tool☆10May 2, 2023Updated 3 years ago
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆15Feb 16, 2026Updated 8 months ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Aug 9, 2026Updated 2 months ago
- Repo that aids in the detection of microsatellite instabilities (MSI) from sequencing data☆21Apr 22, 2024Updated 2 years ago
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- bisulfite sequencing pipeline from fastq to methylation reports☆13Aug 25, 2026Updated 2 months ago
- Analyze and simulate Pool-Seq time series data☆18Jun 16, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]☆11Mar 6, 2024Updated 2 years ago
- Genome Scripts used in fungal comparative genomics☆66Sep 25, 2020Updated 6 years ago
- ☆16Oct 9, 2024Updated 2 years ago
- Infer demographic history with the Moran model☆52Jun 14, 2025Updated last year
- A Python library for performing DNA fragment-analysis☆15Aug 28, 2018Updated 8 years ago
- ☆27Updated this week
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Mar 28, 2017Updated 9 years ago