Eslam-Samir-Ragab / Sequence-database-curatorLinks
This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).
☆15Updated 6 years ago
Alternatives and similar repositories for Sequence-database-curator
Users that are interested in Sequence-database-curator are comparing it to the libraries listed below
Sorting:
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- visualising sequence similarity with Circos☆41Updated 6 years ago
- ☆53Updated 4 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆26Updated 3 years ago
- ☆27Updated 5 years ago
- Protein Alignment and Detection Interface☆60Updated last year
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆36Updated 6 years ago
- ☆35Updated 2 years ago
- ☆39Updated 2 years ago
- A program for detection of tRNA genes☆71Updated 2 years ago
- MARS: improving Multiple circular sequence Alignment using Refined Sequences☆30Updated 5 months ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆42Updated 5 years ago
- Visualize whole genome alignments as linear maps☆73Updated 2 months ago
- A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data☆30Updated 4 years ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- SHOOT.bio - the phylogenetic search engine☆27Updated 2 years ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 4 months ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks☆25Updated last year
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- A program for divvying or partially filtering multiple sequence alignments☆27Updated 6 years ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.☆20Updated 4 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated 2 weeks ago
- collection of bioinformatic scripts☆31Updated last year
- Pangenome analysis of eukaryotes.☆19Updated 5 years ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆48Updated last year
- A versatile toolkit for k-mers with taxonomic information☆79Updated last month
- Some useful python scripts for biologists☆32Updated 11 months ago
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆54Updated 3 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago