This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).
☆15May 9, 2019Updated 7 years ago
Alternatives and similar repositories for Sequence-database-curator
Users that are interested in Sequence-database-curator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data☆30Apr 22, 2021Updated 5 years ago
- Genome-scale metabolic model of Methylococcus capsulatus.☆12Apr 12, 2019Updated 7 years ago
- A small collection of useful tutorials and links☆15Apr 13, 2024Updated 2 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Jul 6, 2023Updated 3 years ago
- cy3sbml: SBML for Cytoscape 3☆15Jan 22, 2026Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 8 years ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆28Updated this week
- Application for hosting gene expression and ontology data with Shiny☆17Jan 8, 2018Updated 8 years ago
- Bits and pieces for the carpentries workshops☆17May 24, 2026Updated last month
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing☆41Dec 11, 2018Updated 7 years ago
- Library Carpentry Wikidata☆25Jul 14, 2026Updated last week
- A pipeline for the computational evaluation of RNA-Seq data☆40Sep 10, 2024Updated last year
- Galaxy Wrappers and helpers for the MISA ttols☆11Oct 11, 2014Updated 11 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An ultrafast tool for genome-wide survey of microsatellites and primer design☆37Oct 16, 2024Updated last year
- MicroPheno Project☆12Oct 21, 2022Updated 3 years ago
- A deep learning framework for essential gene prediction☆12Aug 17, 2020Updated 5 years ago
- Data and scripts for Zika virus tutorial☆10Updated this week
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Apr 28, 2023Updated 3 years ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆20Feb 15, 2026Updated 5 months ago
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 3 months ago
- GEAR [GEnetic Analysis Repository], contact chenguobo@gmail.com;☆21Dec 31, 2021Updated 4 years ago
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- Presentation and exercises for the Software Sustainability Institute Research Data Visualisation Workshop (RDVW)☆15Apr 10, 2018Updated 8 years ago
- Command Line Interface (CLI) to export METS/ALTO documents to other formats.☆13Apr 25, 2022Updated 4 years ago
- ☆17Mar 1, 2026Updated 4 months ago
- A utility framework for the management of genome-scale metabolic models.☆11Mar 28, 2020Updated 6 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 11 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- ☆11Aug 2, 2024Updated last year
- ☆13Jun 16, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Quality control on genetic variants from next-generation sequencing data using random forest☆20May 26, 2022Updated 4 years ago
- Download binary executables and sample data here:☆18Oct 28, 2016Updated 9 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 8 years ago
- ☆16May 15, 2026Updated 2 months ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆18Nov 26, 2019Updated 6 years ago
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19May 3, 2024Updated 2 years ago
- Benchmarking different ways of doing read (taxonomic) classification, with a focus on removal of contamination and MTB classification☆14Apr 8, 2024Updated 2 years ago