Java Bindings (JNI) for bwa
☆20Dec 15, 2016Updated 9 years ago
Alternatives and similar repositories for jbwa
Users that are interested in jbwa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Feb 25, 2017Updated 9 years ago
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆70Sep 5, 2019Updated 6 years ago
- New url: https://github.com/biointec/halvade☆19Apr 19, 2017Updated 9 years ago
- Miscellaneous functionality for manipulating Apache Spark RDDs.☆22Dec 29, 2018Updated 7 years ago
- A better, faster way to count guides in CRISPR screens.☆35Apr 30, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An argument parsing library for Scala☆12May 19, 2026Updated 2 months ago
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Dec 26, 2023Updated 2 years ago
- GenomicsDB☆109Jan 3, 2023Updated 3 years ago
- ☆11Feb 14, 2023Updated 3 years ago
- A Grammarly extension for PopClip.☆15Nov 7, 2023Updated 2 years ago
- bwa-aln-xeon-phi optimizes bwa aln performance on both Xeon and Xeon Phi platform, and support symmetric running model on Xeon and Xeon P…☆17Sep 4, 2014Updated 11 years ago
- Efficient base quality score recalibrator for NGS data☆24Nov 28, 2015Updated 10 years ago
- Package provides java implementation of various clustering algorithms☆11Jun 5, 2017Updated 9 years ago
- The hottest login theme around for KDE Plasma 5☆14Nov 12, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆15May 3, 2023Updated 3 years ago
- Rust binding for WFA2-lib☆10Jun 7, 2022Updated 4 years ago
- An external library for delivering Slurm Elastic Computing.☆12Mar 31, 2017Updated 9 years ago
- Discovery of communities in Pore-C concatemers☆16Feb 12, 2025Updated last year
- Published methods☆15Oct 19, 2016Updated 9 years ago
- Tools for participants in the ICGC-TCGA DREAM Mutation Calling challenge☆15Dec 10, 2015Updated 10 years ago
- An example of bioinformatics and bigdata tools can playing nicely together☆14May 17, 2016Updated 10 years ago
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Docker based Bugzilla development environment☆11Nov 1, 2016Updated 9 years ago
- ☆12Jan 27, 2023Updated 3 years ago
- Google Cloud Dataflow pipelines such as Identity-By-State as well as useful utility classes.☆38Aug 9, 2023Updated 2 years ago
- Pipeline of tools to process raw fastq data and produce meaningful genomic data☆14Feb 20, 2020Updated 6 years ago
- ☆12Oct 31, 2020Updated 5 years ago
- ☆17May 25, 2026Updated 2 months ago
- A high-performance HGVS variant nomenclature parser and normalizer written in Rust☆26Updated this week
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated 2 years ago
- Indel caller for DNA-seq or RNA-seq☆16Aug 8, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- High-fidelity 5mC DNA methylation detection model for PacBio HiFi reads☆13Apr 10, 2026Updated 3 months ago
- This repository contains information about latest release from Genome in a Bottle project☆75Aug 30, 2019Updated 6 years ago
- Rscripts collection for ploting in daily research life☆10Jan 15, 2021Updated 5 years ago
- Hardware Acceleration of Long Read Pairwise Overlapping in Genome Sequencing: Open Source Repository☆34Nov 8, 2024Updated last year
- ☆18Sep 24, 2024Updated last year
- FAstqc DAta PArser - A minimal parser to parse FastQC output data.☆16Apr 9, 2016Updated 10 years ago
- ☆12Dec 26, 2018Updated 7 years ago