haddocking / binding-affinity-benchmarkLinks
Protein-protein binding affinity benchmark
☆16Updated 8 months ago
Alternatives and similar repositories for binding-affinity-benchmark
Users that are interested in binding-affinity-benchmark are comparing it to the libraries listed below
Sorting:
- Tutorial files☆12Updated last year
- ☆13Updated 8 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- ☆18Updated last year
- ☆20Updated 3 years ago
- A fork of Autodock Vina for DeltaVina scoring function☆10Updated 8 years ago
- ☆27Updated 2 weeks ago
- ☆30Updated 5 months ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Updated 4 years ago
- Some scripts that I keep using over and over.☆20Updated 3 months ago
- ☆25Updated 2 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- A program fror inter-protein contact prediction from structures of interacting proteins☆19Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 4 years ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- MEGADOCK on Google Colaboratory☆18Updated 2 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated last year
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- Scoring methods for predicting the DDG upon protein mutation☆15Updated 2 years ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Updated 7 months ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last month
- ☆23Updated 4 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- ☆22Updated 2 years ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated 3 weeks ago