pepamengual / UEPLinks
☆9Updated 2 years ago
Alternatives and similar repositories for UEP
Users that are interested in UEP are comparing it to the libraries listed below
Sorting:
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated last year
- Automated construction of protein chimeras and their analysis.☆14Updated last year
- Some scripts that I keep using over and over.☆18Updated 5 months ago
- test☆14Updated 4 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 4 months ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Updated 3 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 2 weeks ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Updated 8 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated 8 months ago
- ☆15Updated 6 years ago
- ☆14Updated 3 months ago
- ☆19Updated 6 years ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆17Updated last year
- Kinome-wide structural pocket similarity☆10Updated 2 years ago
- PyMOL Plugin for displaying polar contacts☆17Updated 6 years ago
- ☆26Updated 3 weeks ago
- development repository for PyInteraph2☆22Updated 2 months ago
- Physical energy function for protein sequence design☆30Updated 2 years ago
- Protein-Ligand Interaction Fingerprints☆20Updated 4 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆42Updated 2 years ago
- ☆19Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- Tutorial files☆11Updated 9 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆8Updated 6 years ago
- MEGADOCK on Google Colaboratory☆17Updated last year
- MSMD (mixed-solvent molecular dynamics) engine and analysis tools☆19Updated 2 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated 2 months ago