Alternatives and similar repositories for DLPacker

Users that are interested in DLPacker are comparing it to the libraries listed below

• tommyhuangthu / FASPR
  Fast, accurate, and deterministic protein side-chain packing
  ☆37Updated 8 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆35Updated 2 years ago
• huhlim / alphafold-multistate
  ☆42Updated last year
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆35Updated 3 months ago
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆35Updated 2 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆44Updated 2 years ago
• tiwarylab / af2rave
  Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2
  ☆59Updated 2 weeks ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆66Updated 5 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆76Updated 2 months ago
• huhlim / cg2all
  Convert coarse-grained protein structure to all-atom model
  ☆46Updated 4 months ago
• ProteinDesignLab / IgVAE
  A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.
  ☆30Updated 3 years ago
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆53Updated 2 months ago
• shuyana / DiffusionProteinLigand
  ☆78Updated last year
• CataAI / PoseX
  PoseX: A Molecular Docking Benchmark
  ☆52Updated 3 months ago
• bunzela / AIzymes
  ☆60Updated last week
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆56Updated 5 months ago
• sokrypton / af2bind
  ☆50Updated 3 months ago
• bjornwallner / alphafoldv2.2.0
  Open source code for AlphaFold.
  ☆39Updated 2 years ago
• tiejundong / FlexPose
  FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.
  ☆54Updated last year
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆114Updated last year
• THGLab / HiQBind
  Workflow to clean up and fix structural problems in protein-ligand binding datasets
  ☆56Updated 5 months ago
• tiwarylab / alphafold2rave
  ☆69Updated last year
• PointSite / PointSite
  PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms
  ☆57Updated 2 years ago
• patrickbryant1 / RareFold
  Structure prediction and design of proteins with noncanonical amino acids
  ☆108Updated last week
• Hoecker-Lab / pocketoptimizer
  Binding pocket optimization based on force fields and docking scoring functions
  ☆34Updated 7 months ago
• HITS-MBM / conan
  Analysis of contacts in molecular dynamics trajectories
  ☆43Updated 5 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆37Updated 4 months ago
• ELELAB / RosettaDDGPrediction
  ☆78Updated 8 months ago