Sanofi-Public / LMR-SurfaceIDLinks
Repo contains source code of the SurfaceID paper
☆23Updated last year
Alternatives and similar repositories for LMR-SurfaceID
Users that are interested in LMR-SurfaceID are comparing it to the libraries listed below
Sorting:
- ☆48Updated 7 months ago
- Making Protein folding accessible to all!☆22Updated last year
- Efficient manipulation of protein structures in Python☆55Updated 8 months ago
- Modelling protein conformational landscape with Alphafold☆51Updated 3 weeks ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 5 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆73Updated 10 months ago
- PyDock Tutorial☆32Updated 7 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆20Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated last year
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆25Updated last year
- Explicit crosslinks in AlphaFold 3☆22Updated 3 months ago
- ☆26Updated this week
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 2 years ago
- A Unified Approach to Protein Engineering☆42Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆63Updated 3 months ago
- ☆69Updated 4 years ago
- Quick mapping of Uniprot sequences to PDB structures☆32Updated 3 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated last month
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆34Updated 5 months ago
- Tool for modelling the CDRs of antibodies☆49Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last month
- ☆33Updated last year
- Physical energy function for protein sequence design☆31Updated 2 years ago
- Binding pocket optimization based on force fields and docking scoring functions☆33Updated 3 months ago