Sanofi-Public / LMR-SurfaceIDLinks
Repo contains source code of the SurfaceID paper
☆26Updated last year
Alternatives and similar repositories for LMR-SurfaceID
Users that are interested in LMR-SurfaceID are comparing it to the libraries listed below
Sorting:
- Making Protein folding accessible to all!☆24Updated last year
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated last week
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆84Updated 2 months ago
- ☆51Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆68Updated 5 months ago
- ☆37Updated 2 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆83Updated last month
- Modelling protein conformational landscape with Alphafold☆54Updated 3 months ago
- Efficient manipulation of protein structures in Python☆60Updated 2 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆51Updated this week
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 5 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 8 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Quick mapping of Uniprot sequences to PDB structures☆36Updated 8 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆36Updated last week
- ☆38Updated 8 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆41Updated last year
- ☆41Updated last year
- ☆52Updated last week
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆82Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 6 months ago
- PyDock Tutorial☆35Updated 7 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Updated 2 months ago
- ☆79Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆74Updated last month