wendao / CAGE-ProxLinks
Computer aided proximal decaging as a universal strategy for temporal protein activation
☆24Updated 3 months ago
Alternatives and similar repositories for CAGE-Prox
Users that are interested in CAGE-Prox are comparing it to the libraries listed below
Sorting:
- Small_molecule_binder_design_use_pseudocycles☆20Updated 9 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- A command-line interface and Python library for generating AlphaFold3 input files.☆35Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated last month
- Making Protein folding accessible to all!☆22Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated last month
- An accurate and efficient protein sequence design approach☆24Updated 5 months ago
- code for IDR binding paper 2025☆47Updated 6 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last week
- PyDock Tutorial☆33Updated 7 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆35Updated last year
- Scores for Hydrophobicity and Charges based on SASAs☆36Updated 2 months ago
- ☆86Updated last month
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- ☆42Updated 2 months ago
- ☆75Updated 6 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆72Updated this week
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- ☆26Updated 3 weeks ago
- ☆123Updated 3 years ago
- ☆33Updated 4 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆48Updated last month
- ☆52Updated last month
- ☆28Updated 6 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆37Updated 2 weeks ago
- ☆52Updated 4 months ago