rtrees: an R package to assemble phylogenetic trees from mega-trees
☆36Aug 9, 2025Updated 6 months ago
Alternatives and similar repositories for rtrees
Users that are interested in rtrees are comparing it to the libraries listed below
Sorting:
- Functions for phylogenetic analyses☆36Nov 10, 2025Updated 3 months ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 2 years ago
- Model and predicts species accounting for their known trophic interaction network☆18Jun 24, 2024Updated last year
- An R pakage to calculate diversity through Hill Numbers☆36Nov 11, 2025Updated 3 months ago
- A Computation of Functional Spaces and Functional Diversity Indices☆30Dec 19, 2024Updated last year
- Materials for the Workshop "Big Data Ecology"☆18Jul 12, 2021Updated 4 years ago
- A book for teaching people how to do comparative methods in R☆22Jul 28, 2023Updated 2 years ago
- I can haz all the phylogenies☆20Dec 5, 2022Updated 3 years ago
- Parsers (rule-based) for information extraction of traits from plant treatments☆14Aug 15, 2025Updated 6 months ago
- Scripts to do interesting things with phylogenetic trees and spatial data☆15May 23, 2018Updated 7 years ago
- This package (an updated version of 'V.PhyloMaker') can generate a phylogenetic tree for vascular plants based on three different botanic…☆23Nov 17, 2022Updated 3 years ago
- R Package to Access Kew Data APIs☆21Jun 30, 2022Updated 3 years ago
- R package to partition R2 among predictors in Generalized linear mixed models☆23Sep 24, 2024Updated last year
- Generating Summaries, Reports and Plots from the World Checklist of Vascular Plants☆22Oct 17, 2025Updated 4 months ago
- Assess biases, uncertainties and coverage in species' occurrence data.☆13Aug 22, 2025Updated 6 months ago
- R package to streamline functional biogeography workflows and provide publication-ready plots☆12Jul 11, 2025Updated 7 months ago
- Taxonomic Database☆44Apr 15, 2024Updated last year
- Machuruku☆32Jan 20, 2025Updated last year
- Querying database aggregators and citing primary sources of resulting occurrence records.☆24Sep 29, 2025Updated 5 months ago
- R tools for integrating phylogenies and ecology☆38Jan 6, 2024Updated 2 years ago
- iSDM is an open-source R package that implements a few functions useful for modeling the spatial distribution of invasive species☆17Jan 12, 2023Updated 3 years ago
- Large-scale taxonomic harmonization of plant names by fuzzy matching and synonymy resolution against the Leipzig Plant List as taxonomic …☆14Nov 7, 2022Updated 3 years ago
- A curated list of R packages used in species distribution modelling☆55Jul 18, 2018Updated 7 years ago
- A High Performance Interface to GBIF☆40Sep 14, 2025Updated 5 months ago
- R package for automated runs and evaluations of ecological niche models.☆55Dec 3, 2025Updated 2 months ago
- Reconstruct Ancestral State in Phylogenies☆27May 21, 2024Updated last year
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆27Jan 30, 2026Updated last month
- Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practice…☆15Jun 28, 2023Updated 2 years ago
- Communities Assembly by Traits: Individuals and beyond☆13Nov 5, 2024Updated last year
- A collection of ecological datasets for teaching☆12Sep 24, 2025Updated 5 months ago
- Tools for data handling and analysis in macroecology☆29Feb 11, 2026Updated 2 weeks ago
- ☆13Aug 18, 2023Updated 2 years ago
- R package for cleaning taxonomic data.☆12Feb 13, 2025Updated last year
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆14May 29, 2024Updated last year
- babette is an R package to work with BEAST2☆46Dec 20, 2025Updated 2 months ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 5 years ago
- Species Presence/Absence R Trends Analyses☆22Jun 18, 2024Updated last year
- An R package for the spatial analysis of population genetic data.☆20Feb 16, 2026Updated last week
- Tools for Coloring Wildlife Distributions in Space-time☆15Apr 29, 2024Updated last year