bigbio / DLEAMSE
A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring
☆11Updated 8 months ago
Alternatives and similar repositories for DLEAMSE:
Users that are interested in DLEAMSE are comparing it to the libraries listed below
- EasyPQP: Simple library generation for OpenSWATH☆10Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆21Updated last week
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 7 months ago
- ☆17Updated 10 months ago
- ☆26Updated last year
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆10Updated 3 years ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆25Updated 4 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 4 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- An easy tool empowering everyone to annotate complex spectra☆22Updated this week
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆11Updated 3 months ago
- ☆16Updated 2 years ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆35Updated 2 months ago
- Spectral entropy for mass spectrometry data.☆24Updated 3 weeks ago
- EuBIC 2023 developer's meeting☆13Updated 2 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆27Updated 3 weeks ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆16Updated 5 months ago
- Democratizing ML in proteomics☆34Updated this week
- Mass spectral library manager☆13Updated 4 years ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆13Updated last week
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 4 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Updated 3 weeks ago
- A Rust library for parsing ProForma peptides and matching them against MS spectra, formally known as rustyms☆27Updated this week
- ☆36Updated 2 weeks ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆14Updated last year
- ☆14Updated 2 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last week