whg-training / statistics-courseLinks
☆14Updated 4 years ago
Alternatives and similar repositories for statistics-course
Users that are interested in statistics-course are comparing it to the libraries listed below
Sorting:
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Updated 2 years ago
- R package for metabolic enzyme enrichment anaylsis☆12Updated 2 months ago
- This is a companion repository for the article "Comparative analysis of machine learning classifiers and calibration algorithms for estim…☆23Updated 3 years ago
- Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed in…☆90Updated last year
- recipes that save time☆145Updated last week
- iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. …☆128Updated 2 months ago
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Updated 3 years ago
- Suite of tools for processing BRB-seq data☆30Updated 7 months ago
- Disease Ontology Semantic and Enrichment analysis☆123Updated this week
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.☆64Updated last year
- Epigenomics Program pipeline to analyze SHARE-seq data.☆23Updated 9 months ago
- Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments☆19Updated 5 months ago
- Single cell analysis in the browser☆155Updated 2 months ago
- data and model repository for single-cell data☆136Updated 2 years ago
- Tutorials, workflows, and convenience scripts for Single Cell Portal☆51Updated last year
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 5 years ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆107Updated 2 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆80Updated 2 years ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆82Updated 7 months ago
- Inferring and visualizing clonal evolution in multi-sample cancer sequencing☆148Updated 5 years ago
- Single-Cell Genotyping Tool☆215Updated 2 years ago
- A Python implementation of edgeR for differential expression analysis☆104Updated 6 years ago
- Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…☆167Updated 2 months ago
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 4 years ago
- ☆82Updated 2 years ago
- Efficient genotyping bi-allelic SNPs on single cells☆155Updated 2 months ago
- Course material in notebook format for learning about single cell bioinformatics methods☆100Updated 9 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- dN/dS methods to quantify selection in cancer and somatic evolution☆230Updated 8 months ago
- pycistarget is a python module to perform motif enrichment analysis in sets of regions with different tools and identify high confidence …☆18Updated last year