Alternatives and similar repositories for statistics-course

Users that are interested in statistics-course are comparing it to the libraries listed below

• igordot / sns
  Analysis pipelines for genomic sequencing data
  ☆68Updated last week
• hbc / knowledgebase
  recipes that save time
  ☆138Updated last month
• OSGA-OPAR / quant-genetics-webinars
  Quantitative Genetics Tools for Mapping Trait Variation to Mechanisms, Therapeutics, and Interventions - Webinar Series
  ☆29Updated last year
• DataBiosphere / terra-docker
  ☆29Updated last month
• saezlab / ocean
  R package for metabolic enzyme enrichment anaylsis
  ☆12Updated 7 months ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆15Updated 2 years ago
• UMCUGenetics / MutationalPatterns
  R package for extracting and visualizing mutational patterns in base substitution catalogues
  ☆106Updated 2 years ago
• ChristofferFlensburg / superFreq
  Analysis pipeline for cancer sequencing data
  ☆110Updated last month
• JEFworks-Lab / HoneyBADGER
  HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data
  ☆97Updated 3 years ago
• theislab / AutoGeneS
  ☆59Updated 3 years ago
• gaolabtools / scNanoGPS
  Single cell Nanopore sequencing data for Genotype and Phenotype
  ☆53Updated 3 weeks ago
• MarioniLab / DropletUtils
  Clone of the Bioconductor repository for the DropletUtils package.
  ☆59Updated last week
• COMBINE-lab / simpleaf
  A rust framework to make using alevin-fry even simpler
  ☆54Updated last month
• YeoLab / outrigger
  Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data
  ☆66Updated 5 years ago
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆30Updated 3 months ago
• molgenis / systemsgenetics
  Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool
  ☆173Updated 5 months ago
• YeoLab / clipper
  A tool to identify CLIP-seq peaks
  ☆68Updated 2 years ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆67Updated 2 months ago
• YuLab-SMU / DOSE
  Disease Ontology Semantic and Enrichment analysis
  ☆119Updated last month
• limix / limix
  Linear mixed model for genomic analyses.
  ☆104Updated 4 years ago
• single-cell-genetics / cellsnp-lite
  Efficient genotyping bi-allelic SNPs on single cells
  ☆143Updated 11 months ago
• 10XGenomics / subset-bam
  ☆74Updated last year
• thelovelab / tximport
  Transcript quantification import for modular pipelines
  ☆138Updated last year
• ENCODE-DCC / caper
  Cromwell/WDL wrapper for Python
  ☆57Updated last year
• DeplanckeLab / BRB-seqTools
  Suite of tools for processing BRB-seq data
  ☆28Updated this week
• LuyiTian / FLAMES
  Full-length transcriptome splicing and mutation analysis
  ☆83Updated 11 months ago
• saezlab / CARNIVAL
  CAusal Reasoning for Network Identification with integer VALue programming in R
  ☆59Updated last year
• t-neumann / slamdunk
  Streamlining SLAM-seq analysis with ultra-high sensitivity
  ☆48Updated last year
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated 6 months ago
• czbiohub-sf / cerebra
  A tool for fast and accurate summarizing of variant calling format (VCF) files
  ☆60Updated 2 years ago