Statistical quality evaluation of dimensionality reduction algorithms
☆30Dec 17, 2025Updated 9 months ago
Alternatives and similar repositories for EMBEDR
Users that are interested in EMBEDR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PhiSpace for continuous phenotyping single-cell and spatial transcriptomics data☆17Sep 10, 2026Updated last week
- Blazingly fast, streaming duplicate detection for NGS data☆21Aug 24, 2026Updated 3 weeks ago
- A probabilistic cell typing algorithm for spatial transcriptomics.☆26Jun 24, 2026Updated 2 months ago
- ☆19Apr 16, 2026Updated 5 months ago
- A set of notebooks related to convex optimization, variational inference and numerical methods for signal processing, machine learning, d…☆31May 7, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner☆23May 1, 2024Updated 2 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆20Apr 24, 2024Updated 2 years ago
- BiomeNED main code☆12Jul 25, 2019Updated 7 years ago
- ☆16Nov 5, 2021Updated 4 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 5 years ago
- A formula interface for model-first PCA; PCA for the people!☆13Aug 23, 2024Updated 2 years ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 7 years ago
- Materials for the INF 515: Comparative Genomics course at NAU taught by Prof. Marc Tollis☆13Apr 3, 2025Updated last year
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆13Mar 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆14Aug 5, 2020Updated 6 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆12Mar 29, 2023Updated 3 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆49Feb 25, 2024Updated 2 years ago
- ☆16Sep 8, 2024Updated 2 years ago
- An R package for learning log-ratio biomarkers from high-throughput sequencing data.☆23Mar 31, 2023Updated 3 years ago
- Pan gGnome Viewer☆10Updated this week
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- Course Notes for PSYC 621 (Bayesian Data Analaysis, 2019 Fall)☆15Jun 5, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bringing core concepts from anywidget to R☆22Aug 10, 2025Updated last year
- ☆14Sep 11, 2023Updated 3 years ago
- R package: Manifold learning in R☆14Apr 7, 2020Updated 6 years ago
- ☆14Apr 4, 2023Updated 3 years ago
- scripts for analysis associated with Cas9Enrichment publication☆12Feb 10, 2020Updated 6 years ago
- Residue Level Alignment☆22Nov 21, 2024Updated last year
- Koi Fish Pond☆14Mar 10, 2011Updated 15 years ago
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- NEFF Calculator and MSA File Converter☆16May 6, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Efficient retrieval head analysis with triton flash attention that supports topK probability☆13Jun 15, 2024Updated 2 years ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆12Oct 31, 2024Updated last year
- ☆19Nov 26, 2020Updated 5 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- Utility functions to extend and optimize GenomicRanges functionality.☆10Jul 9, 2026Updated 2 months ago
- Genomic coordinates of problematic genomic regions as GRanges☆54Aug 7, 2026Updated last month
- ☆20Nov 24, 2025Updated 9 months ago