A collection of easy-to-use custom ggplot2-based functions for data exploration and analysis. Each function handles data preprocessing and returns a ggplot2 object that can be further customized using standard ggplot2 syntax. Includes general-purpose and domain-specific visualizations.
☆27Dec 23, 2025Updated 10 months ago
Alternatives and similar repositories for ggrecipes
Users that are interested in ggrecipes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deep Learning Framework for Transposable Element Discovery and Annotation☆12Aug 18, 2026Updated 2 months ago
- Metapresence is a Python tool to calculate metrics to assess the evenness of the coverage distribution on DNA sequences, in order to infe…☆10Feb 18, 2025Updated last year
- ☆27Jan 29, 2026Updated 9 months ago
- Improved long-read assembly by preserving contained reads☆30Aug 22, 2024Updated 2 years ago
- Unsupervised Deep Gene Finding☆40Oct 21, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆14Mar 14, 2024Updated 2 years ago
- Annotation Extraction Genomic Integration Suite (AEGIS) is a powerful and flexible Python-based suite for the manipulation, analysis, and…☆16Updated this week
- Illumina read substitution and indel error corrector. Processes human WGS 45x depth reads in about 4 hours, resulting in the reads qualit…☆10Sep 17, 2026Updated last month
- team lander github repo☆10Aug 7, 2021Updated 5 years ago
- ANnotation-based ANalysis of Specific Interactions☆11Updated this week
- MetagenOmic read Re-Assigner and abundance quantifier☆22Jun 24, 2026Updated 4 months ago
- Fast Species Tree Inference☆11Aug 17, 2026Updated 2 months ago
- Tool for DNA species identification based on variation in short k-mer frequencies☆10Aug 4, 2026Updated 3 months ago
- A Snakemake workflow for recovery of plastid genomes from metagenomic samples☆11Nov 16, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- ☆36Jun 24, 2026Updated 4 months ago
- Fast tool to build the core genome of prokaryotic genomes. Can handle large datasets. Dependencis: Usearch & Numpy☆10Nov 26, 2025Updated 11 months ago
- Grabbing genome accessions & download info based on taxonomy, using the NCBI REST API, w00t☆12Feb 23, 2025Updated last year
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- CLI tool to process and analyze MAF files ( Multiple alignment format )☆12Apr 13, 2026Updated 6 months ago
- clustering method for single-cell transcriptomics data☆11Oct 11, 2026Updated last month
- a deep generative model for single-cell survival analysis☆27Dec 2, 2025Updated 11 months ago
- R package for distilling functional annotations of bacterial genomes and metagenomes☆12Feb 27, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Robust and scalable single-cell signature scoring☆29Nov 3, 2026Updated last week
- ZGA prokaryotic genome assembly and annotation pipeline☆13Sep 13, 2024Updated 2 years ago
- Assessing the quality of prokaryotic genomes, filtering and dereplication☆10Aug 26, 2022Updated 4 years ago
- MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data☆13Jun 9, 2026Updated 5 months ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- A pipeline for extracting Presence-Absence Variations (PAVs) in eukaryotic and prokaryotic genomes across multiple assemblies.☆11May 21, 2026Updated 5 months ago
- A repo to reproduce the experiments in the YACHT manuscript☆12Nov 2, 2023Updated 3 years ago
- This repository releases the model weights of ANNA16, an end-to-end tool that predicts 16S rRNA gene copy number (GCN) from 16S rRNA sequ…☆12Oct 28, 2026Updated 2 weeks ago
- ☆15Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- ☆16Aug 18, 2026Updated 2 months ago
- ☆14Oct 29, 2024Updated 2 years ago
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆26Mar 11, 2026Updated 8 months ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆58May 8, 2026Updated 6 months ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆31Jan 15, 2026Updated 9 months ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
Are these results useful?