dominikkempa / faster-minuter
Wavelet tree based on a fixed block boosting technique
☆16Updated 3 years ago
Alternatives and similar repositories for faster-minuter:
Users that are interested in faster-minuter are comparing it to the libraries listed below
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 6 years ago
- R-Index-F Library for Pattern Matching☆13Updated 8 months ago
- External memory suffix array construction using inducing☆10Updated 4 years ago
- Implementation of a Backpack Quotient Filter☆11Updated 9 months ago
- A tool for merging large BWTs☆26Updated 4 years ago
- modified from gitlab.com/manzai/Big-BWT to support fasta files☆9Updated 2 months ago
- Relative data structures based on the BWT☆12Updated 6 years ago
- A cheatsheet for most common Stringology tasks☆15Updated 4 years ago
- Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays☆13Updated last week
- An optimal space run-length Burrows-Wheeler transform full-text index☆62Updated last year
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- Compact Tree Representation☆16Updated 8 years ago
- Fast and cache-efficient full-text pangenome index☆27Updated 3 weeks ago
- vector illustrations of BWT based searching on small strings☆16Updated 5 years ago
- A space-efficient compressor based on the Re-Pair grammar☆11Updated 8 years ago
- LZ Double factor Factorization.☆11Updated 8 years ago
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆27Updated 2 months ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 3 years ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆15Updated 3 years ago
- Ultra fast MSD radix sorter☆11Updated 4 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆43Updated last year
- Prefix Free Parsing☆8Updated last year
- Parallel Wavelet Tree and Wavelet Matrix Construction☆26Updated last year
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆84Updated last year
- Efficient construction of the BWT using string compression☆17Updated 6 months ago
- dynamic-updateable-index☆11Updated 9 years ago
- Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]☆26Updated 2 years ago
- A hash map using the BooPHF perfect hash function☆12Updated 8 years ago
- A lightweight suffix-sorting library enhanced with LCP construction☆11Updated 5 years ago
- Dynamic succinct/compressed data structures☆112Updated 11 months ago