dominikkempa / faster-minuter
Wavelet tree based on a fixed block boosting technique
☆16Updated 3 years ago
Alternatives and similar repositories for faster-minuter:
Users that are interested in faster-minuter are comparing it to the libraries listed below
- R-Index-F Library for Pattern Matching☆13Updated 6 months ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 6 years ago
- Implementation of a Backpack Quotient Filter☆11Updated 6 months ago
- A cheatsheet for most common Stringology tasks☆15Updated 3 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 2 years ago
- Compact Tree Representation☆16Updated 7 years ago
- A tool for merging large BWTs☆26Updated 4 years ago
- Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays☆10Updated 5 months ago
- A space-efficient compressor based on the Re-Pair grammar☆11Updated 7 years ago
- Fast and cache-efficient full-text pangenome index☆27Updated 3 weeks ago
- Parallel Wavelet Tree and Wavelet Matrix Construction☆26Updated last year
- An optimal space run-length Burrows-Wheeler transform full-text index☆62Updated last year
- Relative data structures based on the BWT☆12Updated 6 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆43Updated last year
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆26Updated this week
- Dynamic succinct/compressed data structures☆112Updated 9 months ago
- FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…☆104Updated 10 years ago
- Bit packed vector of integral values☆27Updated 3 weeks ago
- TU DOrtmund lossless COMPression framework☆17Updated 5 months ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆84Updated last year
- LZ Double factor Factorization.☆11Updated 7 years ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆15Updated 3 years ago
- vector illustrations of BWT based searching on small strings☆16Updated 5 years ago
- Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]☆26Updated last year
- A lightweight suffix-sorting library enhanced with LCP construction☆11Updated 4 years ago
- SIMD-parallel BLAST X-drop DP on sequence graphs☆24Updated 8 months ago
- Ultra fast MSD radix sorter☆11Updated 4 years ago
- Collection of Suffix Array Construction Algorithms (SACAs)☆29Updated 5 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆13Updated 3 years ago
- A hash map using the BooPHF perfect hash function☆12Updated 8 years ago