☆16Mar 18, 2025Updated last year
Alternatives and similar repositories for valiDrops
Users that are interested in valiDrops are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to help get fastqs☆19Feb 24, 2026Updated last month
- Code and analysis for the 1000 tools paper☆11Nov 12, 2021Updated 4 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆17Feb 28, 2026Updated 3 weeks ago
- Single-Cell Spatial Explorer☆15Dec 14, 2023Updated 2 years ago
- ☆14Jul 5, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆39Nov 14, 2022Updated 3 years ago
- ☆15Mar 10, 2026Updated 2 weeks ago
- Pan-Cancer Single Cell Classifier☆85May 30, 2024Updated last year
- ☆26Apr 1, 2025Updated 11 months ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆22Nov 16, 2020Updated 5 years ago
- Biology-centered data-driven quality control for scRNA-seq☆19May 22, 2023Updated 2 years ago
- Interactive single cell RNA-seq analysis webserver!☆10Mar 15, 2023Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Nov 18, 2021Updated 4 years ago
- ☆23Sep 4, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆31Jul 13, 2023Updated 2 years ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆10Sep 12, 2025Updated 6 months ago
- Advanced R / Bioconductor training material☆20Mar 15, 2023Updated 3 years ago
- ☆43Jun 11, 2022Updated 3 years ago
- Probabilistic gene expression barcodes for cell type annotation☆26Apr 26, 2022Updated 3 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆37Sep 30, 2025Updated 5 months ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆13Jan 9, 2026Updated 2 months ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Feb 10, 2023Updated 3 years ago
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Inferring multi-modality dynamics for single cell genomics data☆13Dec 18, 2025Updated 3 months ago
- Single-cell Consensus Clusters of Encoded Subspaces☆14Aug 14, 2023Updated 2 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆13Dec 27, 2023Updated 2 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Easy to use encryption tools for R☆18Jan 31, 2025Updated last year
- Single cell analysis tools for expression from RNA-seq in R☆10Feb 3, 2016Updated 10 years ago
- Individual level Differential Expression Analysis for Single cells☆26Dec 24, 2022Updated 3 years ago
- ☆27Sep 2, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆11Mar 11, 2024Updated 2 years ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 2 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆124Mar 19, 2026Updated last week
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Codes for the articles published in Towards Data Science, a journal of Medium.com☆10Jul 16, 2021Updated 4 years ago
- Code and scripts used in analysis of snRNAseq cerebellar cortex atlas☆12Oct 11, 2021Updated 4 years ago
- Uncovering cell identity genes using differential stability of expression in single cells.☆14Jul 2, 2024Updated last year