madsen-lab / valiDropsLinks
☆16Updated 5 months ago
Alternatives and similar repositories for valiDrops
Users that are interested in valiDrops are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last week
- ☆25Updated 2 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- ☆23Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆12Updated last year
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆47Updated last year
- R package for Bioconductor submission☆37Updated 2 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆20Updated 2 weeks ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Tools for assessing clustering robustness☆25Updated last week
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- ☆29Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- ☆24Updated 3 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆15Updated 3 months ago
- R package for analysing single cell data☆60Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- An R package for visualising cell-cell interactions☆44Updated last year
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated 2 months ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- ☆31Updated 5 years ago