Alternatives and similar repositories for Emap2sec

Users that are interested in Emap2sec are comparing it to the libraries listed below

• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 3 years ago
• sarisabban / RMSD
  Calculate the RMSD between two protein structures
  ☆12Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆35Updated 4 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated last year
• ElwynWang / DeepFragLib
  ☆29Updated 4 years ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆46Updated 3 years ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 3 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆55Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 3 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• RosettaCommons / FvHallucinator
  ☆27Updated 2 years ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆28Updated 4 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆43Updated 2 years ago
• Shen-Lab / gcWGAN
  Guided Conditional Wasserstein GAN for De Novo Protein Design
  ☆37Updated 4 years ago
• samgoldman97 / enz-pred
  ☆17Updated 3 years ago
• tommyhuangthu / UniDesign
  Universal framework for physically based computational protein design
  ☆35Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆42Updated 2 years ago
• AmeyaHarmalkar / therML
  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
  ☆8Updated last year
• JinyuanSun / DDGScan
  DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein
  ☆47Updated last year
• psipred / DeepMetaPSICOV
  Deep ResNet-based protein contact prediction
  ☆19Updated 5 years ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆29Updated 2 years ago
• IBM / ReprogBERT
  Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"
  ☆24Updated last year
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆42Updated 3 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆19Updated last year
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 11 months ago