kiharalab / Emap2sec
Emap2sec is a computational tool to identify protein secondary structures
☆16Updated 5 months ago
Alternatives and similar repositories for Emap2sec:
Users that are interested in Emap2sec are comparing it to the libraries listed below
- ☆29Updated 4 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 2 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆49Updated 3 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆29Updated last year
- dMaSIF implementation for google colab☆29Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- ☆21Updated 2 years ago
- Calculate the RMSD between two protein structures☆11Updated 2 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆53Updated 2 years ago
- Paratope Prediction using Deep Learning☆59Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 10 months ago
- A Python 3 version of the protein descriptor package propy☆39Updated last year
- ☆20Updated 3 years ago
- pyFoldX: python bindings for FoldX.☆43Updated 3 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆32Updated 3 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆39Updated last year
- ☆20Updated last year
- ☆34Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆37Updated 2 years ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆53Updated last year
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆27Updated 3 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆35Updated 9 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆34Updated 4 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆25Updated 2 years ago
- ☆38Updated 4 years ago
- Machine learning models for antibody sequences in PyTorch☆38Updated 3 years ago
- ☆26Updated 2 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆68Updated 4 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆20Updated 5 years ago
- ☆13Updated 7 years ago