sarisabban / RMSDLinks
Calculate the RMSD between two protein structures
☆12Updated 3 years ago
Alternatives and similar repositories for RMSD
Users that are interested in RMSD are comparing it to the libraries listed below
Sorting:
- ☆27Updated 2 weeks ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated 2 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- ☆35Updated 2 years ago
- ☆35Updated last month
- Making Protein folding accessible to all!☆24Updated last year
- ☆28Updated 2 years ago
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆35Updated 2 years ago
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- ☆20Updated 3 years ago
- ☆62Updated last year
- ☆34Updated last year
- Extension of ThermoMPNN for double mutant predictions☆43Updated 3 weeks ago
- Predicting protein-ligand binding sites using deep convolutional neural network☆51Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆39Updated 4 years ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- ☆28Updated 8 months ago
- ☆32Updated last year
- Baseline model for PPB-Affinity benchmark data☆30Updated 5 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- ☆25Updated 3 years ago
- ☆44Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆40Updated 10 months ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆32Updated 4 years ago
- ☆88Updated 2 weeks ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆24Updated last year
- ☆15Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆86Updated 4 months ago