sarisabban / RamaNetLinks
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
☆52Updated 2 months ago
Alternatives and similar repositories for RamaNet
Users that are interested in RamaNet are comparing it to the libraries listed below
Sorting:
- ☆29Updated 4 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆71Updated 9 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆35Updated 3 years ago
- ☆34Updated 3 years ago
- RosettaDesign using PyRosetta☆31Updated 5 years ago
- pyFoldX: python bindings for FoldX.☆46Updated 3 years ago
- Modelling of Large Protein Complexes☆37Updated last year
- ☆108Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆42Updated 2 years ago
- Physical energy function for protein sequence design☆30Updated 2 years ago
- Peptide optimization with Machine Learning☆75Updated 2 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 2 years ago
- ☆38Updated 4 years ago
- Tool for modelling the CDRs of antibodies☆48Updated 2 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆47Updated last year
- dMaSIF implementation for google colab☆32Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆38Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆59Updated 3 months ago
- PyDock Tutorial☆32Updated 6 years ago
- Efficient manipulation of protein structures in Python☆54Updated 7 months ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆28Updated 2 years ago
- Universal computational framework for protein redesign/engineering☆35Updated last year
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆84Updated 3 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago