dgarrimar / mantaView external linksLinks
Non-parametric, asymptotic P-value computation for multivariate linear models
☆16Oct 16, 2023Updated 2 years ago
Alternatives and similar repositories for manta
Users that are interested in manta are comparing it to the libraries listed below
Sorting:
- Repository☆10Oct 23, 2024Updated last year
- CGM 主站☆11Mar 10, 2025Updated 11 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated last year
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 2 years ago
- ☆14Nov 17, 2025Updated 2 months ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆15May 25, 2017Updated 8 years ago
- A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.☆15Aug 16, 2024Updated last year
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Updated this week
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Apr 23, 2025Updated 9 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 5 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Nov 26, 2025Updated 2 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 3 weeks ago
- Long RNA-seq analysis workflow☆21Oct 13, 2025Updated 4 months ago
- ☆20Feb 1, 2026Updated last week
- ☆18Dec 15, 2021Updated 4 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆21May 27, 2021Updated 4 years ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆21May 8, 2017Updated 8 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Jun 23, 2016Updated 9 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Jun 14, 2024Updated last year
- ☆10Feb 25, 2024Updated last year
- ☆14Aug 9, 2017Updated 8 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- Multivariate Omnibus Statistical Test☆22Jul 2, 2024Updated last year
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 5 months ago
- ☆24Aug 6, 2021Updated 4 years ago
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- Toolkit for analyzing genetics data from admixed populations☆30Feb 13, 2025Updated last year
- ☆27May 8, 2022Updated 3 years ago
- ☆31Nov 28, 2024Updated last year
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Tutorials for statistical genetics short courses☆37Jan 7, 2026Updated last month
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- ☆20Apr 15, 2025Updated 9 months ago
- A collection of commonly used resources for complex trait genetics.☆36Updated this week
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago