Non-parametric, asymptotic P-value computation for multivariate linear models
☆16Oct 16, 2023Updated 2 years ago
Alternatives and similar repositories for manta
Users that are interested in manta are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 2 years ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 8 years ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated 2 years ago
- CGM 主站☆11Mar 10, 2025Updated last year
- Multivariate Omnibus Statistical Test☆22Jul 2, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Repository☆10Oct 23, 2024Updated last year
- Ultimate Typescript Handbook, published by Orange AVA™☆11Jul 18, 2023Updated 2 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆21May 27, 2021Updated 4 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆15May 25, 2017Updated 8 years ago
- This repository provides a beginner-friendly introduction to statistical computing using the Julia programming language. It covers key st…☆15Apr 2, 2026Updated 2 weeks ago
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- ☆14Aug 9, 2017Updated 8 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Apr 23, 2025Updated 11 months ago
- ☆15Nov 17, 2025Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Aug 15, 2025Updated 8 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 6 months ago
- An automated ChIP-seq pipeline using Nextfow☆18Oct 6, 2022Updated 3 years ago
- Creates a simple OTU table from Kraken2 report.☆13Oct 15, 2024Updated last year
- A git prompt for bash☆16Feb 19, 2026Updated 2 months ago
- faster haplotype-based admixture inference and dating software☆10Nov 25, 2025Updated 4 months ago
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 6 months ago
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago
- DNA/RNA pattern matching algorithm☆21Aug 9, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.☆16Aug 16, 2024Updated last year
- ☆18Dec 15, 2021Updated 4 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- R package to find species interactions from co-occurrence data☆16Feb 27, 2024Updated 2 years ago
- Analysis and visualisation of ecological communities in R☆19Feb 25, 2026Updated last month
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Feb 9, 2026Updated 2 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Mar 25, 2026Updated 3 weeks ago
- A generalised, dynamic DNA reference library for metabarcoding of fishes☆18Mar 17, 2026Updated last month
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆12Jun 11, 2019Updated 6 years ago
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated last year
- ☆10Sep 27, 2022Updated 3 years ago
- ☆24Aug 6, 2021Updated 4 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 7 months ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- Tutorials for statistical genetics short courses☆39Jan 7, 2026Updated 3 months ago