Identify spatially variable genes by projecting to morphologically relevant curves
☆11Jul 12, 2026Updated 3 months ago
Alternatives and similar repositories for MorphoGAM
Users that are interested in MorphoGAM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Model-based Dimensionality Reduction for Single-cell RNA-seq with Generalized Bilinear Models☆17Jul 29, 2025Updated last year
- High-performance sparse data representation and manipulation in R☆13Sep 30, 2026Updated 2 weeks ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆44Nov 10, 2025Updated 11 months ago
- Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data☆17Sep 23, 2026Updated 3 weeks ago
- ☆19Nov 24, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- ☆44Apr 5, 2021Updated 5 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.☆17Mar 3, 2026Updated 7 months ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- ☆12Oct 10, 2026Updated last week
- ABSOLUTE source code that works with allelic copy ratio on both hg19 and hg38☆18Nov 5, 2025Updated 11 months ago
- Function Enrichment analysis and Network construction☆16Apr 25, 2026Updated 5 months ago
- Adds colors to tabs..☆13Mar 30, 2018Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code for working with differential forms in context of control theory on basis of sympy☆14Feb 25, 2019Updated 7 years ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- Analysis code for the results of the spikefinder challenge☆12Feb 19, 2018Updated 8 years ago
- TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data☆16Jul 12, 2019Updated 7 years ago
- Building the cognitive-core to solve ARC-AGI-2☆28Feb 2, 2025Updated last year
- A Hanyu Pinyin font derived from Lato.☆19Jan 15, 2021Updated 5 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆25Jul 10, 2024Updated 2 years ago
- Single-cell dubious embedding detector (scDED): a statistical method for detecting dubious non-linear embeddings☆51May 14, 2025Updated last year
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆24Oct 19, 2022Updated 3 years ago
- This repo contains the assignment and quiz solutions of Natural Language Processing Specialization, offered on Coursera.☆12Apr 6, 2023Updated 3 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆23May 27, 2026Updated 4 months ago
- Clone of the Bioconductor repository for the DropletUtils package.☆67Sep 24, 2026Updated 3 weeks ago
- ☆18Mar 18, 2025Updated last year
- A Binary Tree Visualizer implemented purely in C - A combination of Data Structures & Computer Graphics.☆14Mar 30, 2021Updated 5 years ago
- Exploiting SNP correlations within Random Forest for Genome-Wide Association Studies☆13Oct 20, 2014Updated 11 years ago
- An assortment of small(ish) custom modules for Waybar, including some optional sparkline support☆20Aug 4, 2021Updated 5 years ago
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆24Sep 29, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity (now archived). Pl…☆20May 13, 2026Updated 5 months ago
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 8 years ago
- ☆24Oct 15, 2018Updated 8 years ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 7 years ago
- Code for producing the analysis in the "Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq" manuscr…☆16Feb 5, 2020Updated 6 years ago
- A script for spawning VSCode Remote server sessions on the TUoS HPC clusters.☆15Dec 12, 2024Updated last year
- MultiscaleGraphSignalTransforms.jl is a collection of software tools written in the Julia programming language for graph signal processin…☆12Mar 15, 2026Updated 7 months ago