š DNA Sequence Visualization for Humans
ā42Jul 10, 2021Updated 4 years ago
Alternatives and similar repositories for squiggle
Users that are interested in squiggle are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- šÆ Generate DNA sequences with specified amino acid, codon, and k-mer frequenciesā17Jan 23, 2023Updated 3 years ago
- Lab notebook for people who like the command line.ā11Mar 6, 2026Updated last month
- do multiple nucleotide sequence alignment fast and accuratelyā18Dec 1, 2022Updated 3 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.ā12Mar 11, 2022Updated 4 years ago
- Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platformā17Dec 12, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient ⢠AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Understand DNA structure and how machine learning can be used to work with DNA sequence data.ā38Jan 16, 2021Updated 5 years ago
- Spectral and reproducibility analysis of Hi-C contact mapsā13Mar 18, 2021Updated 5 years ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.ā11Updated this week
- Copy number estimation of highly duplicated sequencesā10Aug 15, 2017Updated 8 years ago
- ā20Jan 18, 2022Updated 4 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing dataā22Nov 17, 2021Updated 4 years ago
- Percentile-normalization method for correcting batch effects in case-control studiesā12Oct 26, 2019Updated 6 years ago
- Python client for MyVariant.info web services.ā23Jan 14, 2025Updated last year
- Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype ā¦ā17Jun 28, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient ⢠AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiationā10Apr 20, 2017Updated 9 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data setsā38Jul 30, 2020Updated 5 years ago
- GitHub Action to launch a workflow using Nextflow Tower.ā12Mar 28, 2023Updated 3 years ago
- ā18Jan 14, 2026Updated 3 months ago
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)ā10Apr 13, 2022Updated 4 years ago
- Example chats from running BioMCP for demonstrationsā17Jun 20, 2025Updated 10 months ago
- ā12Nov 23, 2020Updated 5 years ago
- Library for visualising genomic features in Python.ā15May 12, 2017Updated 8 years ago
- Single Cell RNA-seq UMI Filtering Facilitatorā11Oct 6, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean ⢠AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- How do we process data in different formats like docx, pdf etc and generate insights to be linked with structured data in database?This pā¦ā14May 27, 2020Updated 5 years ago
- WIP : regular expressions for identifying and extracting values from HGVS nomenclatureā14Apr 15, 2018Updated 8 years ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)ā22Aug 28, 2019Updated 6 years ago
- A R package to create a minimal template for scientific manuscripts in .docxā11Jan 15, 2022Updated 4 years ago
- Accessing AlphaMissense Data Resources in Rā13Nov 26, 2025Updated 5 months ago
- Find bimodal, unimodal, and multimodal features in your dataā27Oct 26, 2018Updated 7 years ago
- Tools for handling HiC and 5C dataā24Feb 5, 2024Updated 2 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq dataā61Aug 30, 2022Updated 3 years ago
- Single-cell copy number calling and event history reconstruction.ā28Dec 21, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer ⢠AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.ā18Jan 16, 2026Updated 3 months ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. šµā28Apr 13, 2026Updated 2 weeks ago
- Automatic Arabic Text Summarization using Pythonā12Jul 2, 2020Updated 5 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequencesā24Updated this week
- R wrapper around the Chipmunk2d physics simulation libraryā28Sep 8, 2020Updated 5 years ago
- Python bindings to minimap2ā16Sep 18, 2017Updated 8 years ago
- A read alignment visualization library for long readsā10Aug 6, 2022Updated 3 years ago