IQTLabs / squiggleLinks
📈 DNA Sequence Visualization for Humans
☆41Updated 4 years ago
Alternatives and similar repositories for squiggle
Users that are interested in squiggle are comparing it to the libraries listed below
Sorting:
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆16Updated 2 years ago
- Efficient handling of FASTQ files from Python☆51Updated 3 weeks ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Updated 7 years ago
- A lightweight Python graphing API for genomic features☆15Updated 3 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- List of computational resources for analyzing microbial sequencing data.☆68Updated 2 months ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated last month
- Genomics Research Container Architecture☆48Updated 6 years ago
- A cookiecutter template for Snakemake workflows☆59Updated 3 years ago
- Recipes for bioinformatics analyses with scikit-bio☆42Updated 9 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Pandas DataFrames for phylogenetics☆74Updated 4 years ago
- Scripts for miscelleneous bioinformatics tasks☆48Updated 5 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆11Updated 4 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 5 months ago
- WDL plugin for pytest☆48Updated 2 years ago
- A client for the Ensembl REST API written in the Python programming language☆27Updated 2 months ago
- Perform microbiome-wide association studies with a variety of models☆18Updated 8 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 6 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated last week
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Forensic analysis tool useful in backwards computing information from next-generation sequencing data.☆11Updated 2 weeks ago
- Library for indexing VCF files for random access searches by rsID☆17Updated last month
- Library of snakemake rules.☆12Updated 6 years ago
- a simple read-only sequence database, designed for short reads☆66Updated last year
- A repository for the GenGraph toolkit for the creation and manipulation of graph genomes☆51Updated 3 years ago
- Ansible playbooks for Galaxy Server deployment☆24Updated 2 years ago
- ☆37Updated 4 months ago
- The command-line interface to GGD☆43Updated 2 years ago