Genome-wide imputation pipeline
☆31Jul 30, 2024Updated last year
Alternatives and similar repositories for genipe
Users that are interested in genipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- Interactive Visual Analysis of differential gene expression test results☆22Jan 9, 2017Updated 9 years ago
- probability of mendelian error in trios.☆11Jan 27, 2016Updated 10 years ago
- Early detection of lung cancer☆19Aug 2, 2018Updated 7 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Feb 11, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Codebook from my GWAS cookbook☆194May 26, 2022Updated 3 years ago
- Rare variant test software for next generation sequencing data☆141Jan 26, 2022Updated 4 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 8 years ago
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 10 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 4 months ago
- ☆40Jan 24, 2018Updated 8 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 5 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 2 years ago
- Notes on academic-related things☆27Jul 29, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆26Jun 4, 2025Updated 10 months ago
- Pipelines for NGS, imputation, gwas, ...☆29Dec 18, 2019Updated 6 years ago
- Anno is a variant annotation tool☆24May 18, 2016Updated 9 years ago
- R code to work with the NIH RePORTER API☆11Feb 11, 2026Updated 2 months ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- Non-parametric, asymptotic P-value computation for multivariate linear models☆16Oct 16, 2023Updated 2 years ago
- Repository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper☆11Dec 2, 2025Updated 4 months ago
- ☆14Dec 13, 2023Updated 2 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- A CNN model to identify MEIs in WGS☆13Mar 4, 2025Updated last year
- Code for the in-dev PrediXcan Project☆28Oct 17, 2022Updated 3 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- HGVS variant name parsing and generation☆176Jun 14, 2023Updated 2 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Oct 29, 2025Updated 5 months ago
- Exon-exon splice junctions across SRA☆43Jul 30, 2021Updated 4 years ago
- Fast RNAseq pipeline☆10Mar 17, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- VCF visualization interface☆178Updated this week
- WGS Pipeline☆13Jan 19, 2018Updated 8 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Step by step tutorial for CAGE analysis☆10Sep 18, 2025Updated 6 months ago
- reorganize paper of deconvolution method☆11Dec 14, 2023Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Feb 23, 2026Updated last month