jhuapl-boss / boss

Related projects: ⓘ

• NeuroML / NeuroML2
  This repository hosts the NeuroML 2 Schema, the ComponentType definitions in LEMS and the core documentation of NeuroML2.
  ☆50Updated this week
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆26Updated last week
• piximi / piximi_old
  a free, open-source web app for annotating, training, and evaluating image understanding algorithms
  ☆25Updated 2 years ago
• neurodata / ndstore
  code for storing neurodata images and image annotations
  ☆38Updated 6 years ago
• ericmjonas / circuitdata
  Datasets
  ☆26Updated 9 years ago
• NeuralEnsemble / neurotune
  Package for fitting/optimization of NeuroML models
  ☆16Updated 9 months ago
• natverse / nat.nblast
  R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package.
  ☆16Updated 3 weeks ago
• BigNeuron / BigNeuron-Wiki
  Documentations of BigNeuron Project progress
  ☆24Updated 8 years ago
• NeuroML / Cvapp-NeuroMorpho.org
  Version of Cvapp as used on NeuroMorpho.org. Based on Robert Cannon's initial implementation.
  ☆14Updated 2 months ago
• dandi / dandi-cli
  DANDI command line client to facilitate common operations
  ☆21Updated this week
• project-improv / improv
  Adaptive Platform for Neuroscience Experiments
  ☆37Updated 2 weeks ago
• AllenInstitute / dipde
  Numerical solver for coupled population density equations
  ☆22Updated last year
• BIC-MNI / libminc
  libminc is the core library and API of the MINC toolkit
  ☆19Updated 5 months ago
• imjoy-team / imjoy-rpc
  The RPC library used in ImJoy.
  ☆23Updated last month
• datajoint / datajoint-labbook
  DataJoint LabBook is a graphical user interface built using React to facilitate working with DataJoint computational pipelines.
  ☆11Updated last year
• NeuroML / pyNeuroML
  A single package in Python unifying scripts and modules for reading, writing, simulating and analysing NeuroML2/LEMS models.
  ☆36Updated this week
• neurodata / ardent
  Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.
  ☆15Updated 4 years ago
• epnev / continuous_time_ca_sampler
  The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…
  ☆19Updated 7 years ago
• portugueslab / split_dataset
  A minimal package for saving and reading large HDF5-based chunked arrays.
  ☆15Updated 2 years ago
• dani-lbnl / SC20_pyHPC
  pyHPC workshop
  ☆11Updated 2 years ago
• datalad / tutorials
  A registry of tutorials, workshop material, videos and other educational resources to help you learn more about DataLad.
  ☆13Updated last year
• NeuralEnsemble / libNeuroML
  This package provides Python libNeuroML, for working with neuronal models specified in NeuroML
  ☆39Updated last week
• alimuldal / PyFNND
  A Python implementation of fast non-negative deconvolution
  ☆23Updated 4 years ago
• knossos-project / knossos
  KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…
  ☆73Updated 3 weeks ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆39Updated 2 months ago
• SainsburyWellcomeCentre / amap-python
  ☆18Updated this week
• NeuralEnsemble / neuroConstruct
  neuroConstruct: biophysically detailed neuronal modelling in 3D
  ☆48Updated last month
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆74Updated 3 weeks ago
• CameraIA / F3D
  ☆12Updated this week
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆47Updated 2 months ago