MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis
☆12Feb 16, 2026Updated last month
Alternatives and similar repositories for MONSDA
Users that are interested in MONSDA are comparing it to the libraries listed below
Sorting:
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- 🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉☆17Jun 2, 2020Updated 5 years ago
- ☆10Apr 30, 2019Updated 6 years ago
- Framework for multi-omics data integration by autoencoders☆31Jan 20, 2026Updated 2 months ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Oct 31, 2025Updated 4 months ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated last month
- RNAcentral website source code☆33Updated this week
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆11Oct 11, 2022Updated 3 years ago
- Nextflow pipeline to convert VCF files into MAF files.☆10Dec 12, 2025Updated 3 months ago
- Golang VNC screenshot utility☆13Feb 19, 2018Updated 8 years ago
- iCount, protein-RNA interaction analytics☆23Dec 14, 2021Updated 4 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆72Oct 16, 2025Updated 5 months ago
- A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets☆13Mar 12, 2026Updated last week
- ☆10Aug 29, 2023Updated 2 years ago
- ☆15Feb 5, 2025Updated last year
- Edit distance library for Haskell☆27Jan 19, 2017Updated 9 years ago
- ☆13Feb 11, 2026Updated last month
- a novel next-generation sequencing simulator using position and genomic contexts based error profiles☆13Dec 18, 2020Updated 5 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Nov 5, 2024Updated last year
- 整合型的对于生物学注释的信息/GO和KEGG全谱注释和富集☆14Nov 8, 2017Updated 8 years ago
- Octree is a shallow tree structure for 3-dimensional points☆20Jul 22, 2020Updated 5 years ago
- Colorized cat command in Python. Uses Pygments to do automatic syntax highlighting.☆13Dec 12, 2019Updated 6 years ago
- ixgbe driver for Redox based on ixy.rs☆11Jul 30, 2019Updated 6 years ago
- ☆12Sep 27, 2018Updated 7 years ago
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- A userspace tunnel between two hosts mapping ports on client machine to addresses reachable from server machine.☆17Feb 25, 2022Updated 4 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- Efficient, high-level dynamic programming☆28Jul 19, 2023Updated 2 years ago
- Here we proposed two novel algorithms, the Direct Subsequence Dynamic Time Warping for nanopore raw signal search (DSDTWnano) and the con…☆10Jul 13, 2020Updated 5 years ago
- Galaxy RNA workbench☆41Oct 10, 2020Updated 5 years ago
- Linearising and de-linearising functions for `nalgebra`'s `Point`s.☆12May 5, 2023Updated 2 years ago
- This is a simple introductory tutorial to help you get started with using BEAST2 and its accomplices.☆11Jul 8, 2025Updated 8 months ago
- Galaxy Tool wrappers☆122Updated this week
- A VSCode extension pack for nf-core developers.☆15Mar 7, 2025Updated last year
- A Pedantic FASTA Parser and Tool Set☆14Apr 22, 2020Updated 5 years ago
- Galaxy Workflow Format 2☆13Updated this week
- Remove contaminated contigs from genomes using k-mers and taxonomies.☆60Nov 3, 2023Updated 2 years ago