molgenis / vip
Variant Interpretation Pipeline
☆23Updated last week
Alternatives and similar repositories for vip:
Users that are interested in vip are comparing it to the libraries listed below
- Location of public benchmarking; primarily final results☆18Updated this week
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆31Updated last year
- WDL workflows for variant calling and assembly using ONT☆32Updated this week
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated last year
- ☆39Updated 5 months ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆32Updated 2 months ago
- ☆23Updated 2 months ago
- Structural variant (SV) analysis tools☆35Updated 7 months ago
- A simple script to create a customizable html file from an AnnotSV output.☆18Updated 9 months ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- ☆39Updated 9 months ago
- vembrane filters VCF records using python expressions☆58Updated 4 months ago
- ☆29Updated 2 years ago
- ☆35Updated 3 years ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆25Updated 2 months ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆35Updated 7 months ago
- TIDDIT - structural variant calling☆74Updated last month
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆45Updated this week
- Structural variant caller☆54Updated 3 years ago
- Copy number estimation and variant calling for duplicated genes using WGS.☆27Updated 2 weeks ago
- ☆20Updated last year
- An insertion caller for Illumina paired-end WGS data.☆23Updated 6 months ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆30Updated 3 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆46Updated 4 years ago
- Structural Variant Prediction Viewer☆34Updated 7 years ago
- Model files for Sentieon variant callers☆14Updated this week
- Immuological gene typing and annotation for genome assembly☆31Updated 4 months ago
- Master of Pores 2☆23Updated 2 months ago
- Structural Variant Index☆71Updated 2 months ago