brentp / poverlapLinks
significance testing over interval overlaps
☆30Updated 4 years ago
Alternatives and similar repositories for poverlap
Users that are interested in poverlap are comparing it to the libraries listed below
Sorting:
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- BigWig manpulation tools using libBigWig and htslib☆29Updated 10 months ago
- ☆21Updated 2 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- ☆12Updated last month
- Chromatin segmentation in R☆19Updated 7 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 4 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆38Updated 2 years ago
- Personal diploid genome creation and coordinate conversion☆29Updated 2 months ago
- Location of public benchmarking; primarily final results☆18Updated 4 months ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- ☆26Updated 2 months ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last month
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 2 months ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- ☆11Updated 6 years ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 5 years ago
- ☆9Updated 8 years ago
- Liftover VCF files☆18Updated 8 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago