Alternatives and similar repositories for flypylib:

Users that are interested in flypylib are comparing it to the libraries listed below

• aschampion / diluvian
  Flood filling networks for segmenting electron microscopy of neural tissue
  ☆23Updated 2 years ago
• seung-lab / corgie
  Command line tool for registration of very large 3D volumes.
  ☆13Updated last year
• seung-lab / fastmorph
  Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing.
  ☆13Updated 2 months ago
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆14Updated this week
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆45Updated this week
• ilastik / nature_methods_multicut_pipeline
  ☆19Updated 3 years ago
• funkelab / lsd
  🌈
  ☆53Updated last year
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆50Updated 3 weeks ago
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆36Updated 6 months ago
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆17Updated 3 weeks ago
• janelia-flyem / NeuTu
  Software package for neuron reconstruction and visualization
  ☆38Updated 9 months ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆19Updated 2 months ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated this week
• CAVEconnectome / nglui
  ☆10Updated this week
• seung-lab / DeepEM
  Deep Learning for EM Connectomics
  ☆14Updated 2 years ago
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆23Updated this week
• janelia-cellmap / cellmap-segmentation-challenge
  Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …
  ☆18Updated this week
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• funkelab / motile
  Multi-Object Tracker using Integer Linear Equations
  ☆28Updated 3 weeks ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last year
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆40Updated 6 months ago
• haesleinhuepf / napari-assistant
  ☆24Updated last month
• jhuapl-boss / intern
  Python SDK for interacting with the BossDB REST API
  ☆21Updated 2 months ago
• RivuletStudio / rivuletpy
  Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…
  ☆66Updated 2 years ago
• JaneliaSciComp / VVDViewer
  3D/4D volumetric rendering of microscopy data
  ☆21Updated last month
• divelab / deepem3d
  ☆18Updated 6 years ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 3 years ago
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆79Updated 2 weeks ago
• nadavyayon / Intensify3D
  Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…
  ☆18Updated 3 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆81Updated last month