kiharalab / GNN_DOVELinks
Code for "Protein Docking Model Evaluation by Graph Neural Networks"
☆59Updated 2 years ago
Alternatives and similar repositories for GNN_DOVE
Users that are interested in GNN_DOVE are comparing it to the libraries listed below
Sorting:
- ☆106Updated 2 years ago
- Official repository of EnzymeFlow☆92Updated 5 months ago
- ☆86Updated 2 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆71Updated 4 years ago
- ☆108Updated 2 years ago
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆33Updated last year
- ☆39Updated last year
- ☆80Updated last year
- Official repository of GENzyme☆51Updated 6 months ago
- Open source code for AlphaFold.☆39Updated 2 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆45Updated last year
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆55Updated last year
- ☆83Updated 8 months ago
- Tool for modelling the CDRs of antibodies☆48Updated 2 years ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- ☆126Updated last year
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆74Updated 3 weeks ago
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 4 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆31Updated last month
- Diffusion model based protein-ligand flexible docking method☆105Updated 7 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆123Updated last week
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆89Updated 7 months ago
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Predicting protein-ligand binding sites using deep convolutional neural network☆49Updated 8 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆74Updated last year
- ☆41Updated last year
- ☆44Updated last year