akulikova64 / CNN_protein_landscape

Related projects: ⓘ

• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆17Updated 6 months ago
• zw2x / glinter
  Graph Learning of INTER-protein contacts
  ☆9Updated 2 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated 10 months ago
• GBLille / MassiveFold
  ☆21Updated this week
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆29Updated 3 years ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆25Updated 5 months ago
• Furman-Lab / PatchMAN
  ☆24Updated last month
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆18Updated 8 months ago
• StatPhysBio / protein_holography
  Code for holographic machine learning of proteins
  ☆19Updated last year
• samgoldman97 / enz-pred
  ☆16Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆23Updated 10 months ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆34Updated 5 months ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆15Updated 8 months ago
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆24Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆34Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆34Updated 6 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆30Updated 3 months ago
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆22Updated 3 years ago
• zanderharteveld / genesis
  protein backbone refinement
  ☆11Updated last week
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆32Updated last year
• TviNet / NetSolP-1.0
  ☆17Updated 11 months ago
• GodzikLab / FATCAT-dist
  ☆13Updated last year
• BioinfoMachineLearning / CDPred
  Deep transformer for predicting interchain residue-residue distances of protein complexes
  ☆12Updated 6 months ago
• Faezov / PDBrenum
  ☆27Updated 4 months ago
• dina-lab3D / CombFold
  ☆68Updated last week
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆24Updated last month
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆23Updated 5 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆28Updated 4 months ago
• RosettaCommons / FvHallucinator
  ☆25Updated last year
• ba-lab / disteval
  DISTEVAL: A web-server for evaluating protein inter-residue distances
  ☆18Updated 2 years ago