Alternatives and similar repositories for CNN_protein_landscape

Users that are interested in CNN_protein_landscape are comparing it to the libraries listed below

• StatPhysBio / protein_holography
  Code for holographic machine learning of proteins
  ☆23Updated 6 months ago
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆34Updated 3 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆19Updated last year
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆24Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• Furman-Lab / PatchMAN
  ☆26Updated last week
• zw2x / glinter
  Graph Learning of INTER-protein contacts
  ☆9Updated 3 years ago
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆30Updated this week
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆38Updated 2 weeks ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆42Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• KULL-Centre / _2024_cagiada_stability
  ☆66Updated last month
• danny305 / mutcompute2.0
  ☆13Updated 2 years ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆57Updated 3 months ago
• BioinfoMachineLearning / CDPred
  Deep transformer for predicting interchain residue-residue distances of protein complexes
  ☆12Updated last year
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆20Updated last month
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆23Updated last year
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• RosettaCommons / FvHallucinator
  ☆27Updated 2 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 8 months ago
• psipred / DeepMetaPSICOV
  Deep ResNet-based protein contact prediction
  ☆19Updated 5 years ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆42Updated 5 months ago
• kiharalab / Distance-AF
  Public version for Distance-AF
  ☆22Updated last year
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆38Updated last year
• samgoldman97 / enz-pred
  ☆17Updated 2 years ago