akulikova64 / CNN_protein_landscapeLinks
☆14Updated 4 years ago
Alternatives and similar repositories for CNN_protein_landscape
Users that are interested in CNN_protein_landscape are comparing it to the libraries listed below
Sorting:
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆21Updated 2 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆44Updated 3 years ago
- ☆13Updated 3 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆25Updated 8 months ago
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- ☆72Updated 10 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆41Updated last year
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆28Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 6 months ago
- ☆21Updated 2 years ago
- Physical energy function for protein sequence design☆36Updated 2 years ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆63Updated 3 months ago
- ☆29Updated 5 years ago
- Structure-Informed Protein Language Model☆36Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆34Updated 4 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- ☆32Updated last year
- ☆27Updated last month
- Tool for modelling the CDRs of antibodies☆50Updated 3 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆27Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Updated 2 years ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆62Updated 5 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Updated 4 years ago
- Fragment binding prediction with ColabFold☆41Updated 2 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- Ultra-fast in-silico structure mutation☆36Updated 9 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Updated 6 months ago
- Machine learning prediction of enzyme optimum pH☆23Updated 9 months ago