akulikova64 / CNN_protein_landscape
☆13Updated 3 years ago
Alternatives and similar repositories for CNN_protein_landscape:
Users that are interested in CNN_protein_landscape are comparing it to the libraries listed below
- Graph Learning of INTER-protein contacts☆9Updated 3 years ago
- ☆12Updated 2 years ago
- ☆26Updated 8 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Updated 8 months ago
- ☆19Updated last year
- Ultra-fast in-silico structure mutation☆32Updated 2 weeks ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆34Updated 3 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 6 months ago
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated 10 months ago
- Clusters protein chains based on CA distance difference☆14Updated 2 months ago
- ☆17Updated 2 years ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆29Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆30Updated 4 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated last month
- ML toolset for creating TED: The Encyclopedia of Domains☆17Updated last month
- Docking Tool Benchmarking Workflow☆23Updated 9 months ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆28Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆12Updated last year
- ☆17Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆29Updated 2 weeks ago
- ☆14Updated 2 months ago
- ☆66Updated last month
- ☆34Updated 7 months ago
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆30Updated 3 months ago
- Calculate the RMSD between two protein structures☆12Updated 2 years ago