izhbannikov / haploR
haploR: utilities for mining Haploreg and other similar web-based tools
☆9Updated 7 months ago
Related projects ⓘ
Alternatives and complementary repositories for haploR
- software package for integrative genetic association analysis☆32Updated last year
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- ☆21Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 3 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 5 months ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- QTL Discovery using Annotations☆23Updated last year
- Identify cell types and pathways affected by genetic risk loci.☆35Updated 8 months ago
- ☆18Updated 6 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆22Updated 4 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated last year
- Colocalization analysis of genetic association signals☆47Updated this week
- An interactive graphical illustration of genetic associations and their biological context☆15Updated 8 months ago
- ☆32Updated last year
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆20Updated last year
- Multi-Omic Strategies for TWAS☆12Updated last year
- Manhattan++☆26Updated 9 months ago
- A tidy interface for coverage analysis☆24Updated 4 years ago
- ☆18Updated 4 months ago
- An R package for generating comparative regional association plots☆18Updated this week
- TWAS-pipeline☆21Updated 3 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆15Updated 9 months ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆18Updated 2 months ago
- Estimate genetic correlation using predicted expression☆19Updated 6 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago