irinagain / mixedCCALinks
R package for sparse canonical correlation analysis with mixed data types (continuous, binary, zero-truncated)
☆22Updated this week
Alternatives and similar repositories for mixedCCA
Users that are interested in mixedCCA are comparing it to the libraries listed below
Sorting:
- Code for performing PCA followed by CCA☆18Updated 6 years ago
- countsimQC - Compare characteristic features of count data sets☆29Updated 3 weeks ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 3 years ago
- ☆95Updated last year
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Updated 6 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- ☆21Updated 8 years ago
- latentcor is an R package provides estimation for latent correlation with mixed data types (continuous, binary, truncated and ternary).☆16Updated this week
- Differential analysis of multi-omics data based on the Tweedie distribution☆28Updated this week
- Quantify and interpret divers of variation in multilevel gene expression experiments☆68Updated 3 weeks ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆22Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- A tutorial for pathway visualization using tidyverse, igraph, and ggraph☆60Updated last year
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated this week
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- ☆13Updated 2 years ago
- An R package for multivariate adaptive shrinkage.☆92Updated last year
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆106Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 10 months ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Updated 4 months ago
- Topics In Data Science and Bioinformatics☆79Updated last year
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆21Updated last year