irinagain / mixedCCA
R package for sparse canonical correlation analysis with mixed data types (continuous, binary, zero-truncated)
☆20Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for mixedCCA
- Code for performing PCA followed by CCA☆18Updated 5 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated last month
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- Modelling DNA methylation profiles☆21Updated 4 years ago
- Comparison of dimensionality reduction methods☆30Updated 4 years ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 weeks ago
- Various Ideas for Confounder Adjustment in Regression☆23Updated last year
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Updated 5 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆50Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 8 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆43Updated last year
- ☆19Updated 7 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 5 months ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 5 years ago
- ☆20Updated last year
- ☆28Updated last year
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆28Updated 5 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆20Updated 9 months ago
- Explore and share your scRNAseq clustering results☆46Updated last year
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 2 years ago
- post-clustering differential expression test☆35Updated 5 years ago
- Multi-omics studies are available here☆51Updated 2 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆17Updated 3 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 3 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆31Updated 10 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 3 years ago
- We have moved to https://github.com/limix/limix.☆24Updated 7 years ago