aedin / PCAworkshopLinks
An introduction to matrix factorization and PCA and SVD. 
☆41Updated 2 years ago
Alternatives and similar repositories for PCAworkshop
Users that are interested in PCAworkshop are comparing it to the libraries listed below
Sorting:
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 weeks ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 9 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 5 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated this week
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 11 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- countsimQC - Compare characteristic features of count data sets☆29Updated this week
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 6 months ago
- Glimma R package☆50Updated last year
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 5 months ago
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Brings SummarizedExperiment to the tidyverse☆26Updated this week
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 3 months ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Gene-level general linear mixed model☆23Updated 3 weeks ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Course website for Genomic Data Visualization 2024☆26Updated last year
- ☆20Updated 3 months ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- DESeq2 or edgeR☆22Updated 9 years ago
- This is the ensembldb development repository.☆35Updated 2 months ago
- Transcript quantification import with automatic metadata detection☆67Updated 2 weeks ago
- The blog of tidyomics☆14Updated 3 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 2 weeks ago