aedin / PCAworkshopLinks
An introduction to matrix factorization and PCA and SVD.
☆41Updated 2 years ago
Alternatives and similar repositories for PCAworkshop
Users that are interested in PCAworkshop are comparing it to the libraries listed below
Sorting:
- Explore design matrices interactively with R/Shiny☆38Updated 3 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Functional enrichment analysis of high-throughput omics data☆20Updated last year
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- The blog of tidyomics☆14Updated 6 months ago
- Brings SummarizedExperiment to the tidyverse☆29Updated last month
- Transcript quantification import with automatic metadata detection☆67Updated last week
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 8 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 2 months ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆27Updated this week
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago
- Demonstration of the use of an R package to organize a data analysis project☆22Updated 5 years ago
- Glimma R package☆50Updated last year
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last week
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Template for building a bioconductor workshop package using github actions☆21Updated 7 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Course website for Genomic Data Visualization 2024☆26Updated last year
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 7 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆45Updated last month
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- Representation and manipulation of genomic intervals☆46Updated last month
- This is the ensembldb development repository.☆36Updated 5 months ago
- countsimQC - Compare characteristic features of count data sets☆30Updated 3 months ago
- Integrating zingeR with ZINB-WaVE weights☆26Updated 7 years ago