aedin / PCAworkshop
An introduction to matrix factorization and PCA and SVD.
☆41Updated last year
Alternatives and similar repositories for PCAworkshop:
Users that are interested in PCAworkshop are comparing it to the libraries listed below
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- Functional enrichment analysis of high-throughput omics data☆20Updated last week
- Statistical power studies for multi-omics experiments.☆30Updated last year
- Visualise correlation results and test significancies of these☆21Updated 4 years ago
- Glimma R package☆50Updated 4 months ago
- ☆11Updated 4 years ago
- ☆28Updated 6 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated last year
- A tidy interface for coverage analysis☆24Updated 4 years ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 3 weeks ago
- Identify and correct invalid gene symbols☆56Updated 2 months ago
- DESeq2 or edgeR☆22Updated 8 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 3 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 weeks ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆21Updated this week
- R package for benchmarking single cell analysis methods☆30Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆26Updated last year
- ☆16Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆27Updated 2 months ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆50Updated 2 years ago
- Differential expression and allelic analysis, nonparametric statistics☆28Updated 2 weeks ago
- Save and load your R sessions faster using parallel compression☆25Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Read HOMER motif analysis output in R.☆15Updated 6 years ago
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Updated 7 months ago
- Course website for Genomic Data Visualization 2024☆23Updated 10 months ago